Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0036 ATGGCAAATGCTTTGAAAGGTGGCAATGTTATTCTCTCTCTTTCCTCCTTATTGAAGACTACTACCTCTCCCACCCATCGCTCCCTTCTTTCCATTCCCACTCGCTTTTATTCCAAGTTCCCATCTTTCTCTATTTCATCATCATCATTCACTAAAACACCTTCTGGGTTCCCCTCTTTTTGCACTTCCACTCAAGAACCCACACCAATCACTTCTGTTACTGCTGAAAATGAGAACAGTAGCACCAACAGCATTAAGGATATGGCAGGGTTACTTGACATAAGGGTTGGGATGATTGTGAAAGCATGGAAGCATGATGAGGCTGATTCTCTTTATGTTGAAGAGGTTGATATTGGTGAACCTGAACCTAGAATCATTTGCAGTGGCCTTGTCAATTATATCCCCCTTCAACATCTTCAGGGAAAAAGGGTTATTGTTCTTTCCAATCTGAAGGCAAGGAATATGCGTGGTGTCAAGTCTAGCGGAATGCTCATGGCTGCTTCTGATGCGAAGCATGAGAATGTTGAACTCTTGTTCCCTCCCGAGGAAGCAATCCCCGGTGAAAGAATATGGTTTGGATCAGAAGATGAAAAGGATAATCAACCTGATGCCGCCACTCCAAATCAGCTTCAAAAGAAAAAGGTATGGGAATTGGTGCAGCCTCATCTGAAGACAGATGCGTCATGTGTTGCAATATTAGGGGAGCATGTTATGCGCACATCTGCAGGTTCAGTGGCATGCCAATCATTGCACAATGCAAATATCTCATAA 771 0.4345 MANALKGGNVILSLSSLLKTTTSPTHRSLLSIPTRFYSKFPSFSISSSSFTKTPSGFPSFCTSTQEPTPITSVTAENENSSTNSIKDMAGLLDIRVGMIVKAWKHDEADSLYVEEVDIGEPEPRIICSGLVNYIPLQHLQGKRVIVLSNLKARNMRGVKSSGMLMAASDAKHENVELLFPPEEAIPGERIWFGSEDEKDNQPDAATPNQLQKKKVWELVQPHLKTDASCVAILGEHVMRTSAGSVACQSLHNANIS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0036 256 CDD tRNA_bind_EMAP-II_like 91 191 - -
Lal1g0036 256 ProSiteProfiles tRNA-binding domain profile. 88 191 IPR002547 GO:0000049
Lal1g0036 256 Gene3D - 88 256 IPR012340 -
Lal1g0036 256 SUPERFAMILY Nucleic acid-binding proteins 90 255 IPR012340 -
Lal1g0036 256 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 72 256 - -
Lal1g0036 256 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 72 256 - -
Lal1g0036 256 Pfam Putative tRNA binding domain 94 188 IPR002547 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0036 Lal-Chr1 283568 289759 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0036 - - gmx:100810696 347.821