Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0025 ATGGTTCTGTCTCAGAAGCTTCACGAAGCTTTCAAAGGAACAGTGGAAAGGATCACAGGTCCACGAACCGTTTCCGCCTTCAAAGAGAAAGGTGTTCTGAGTGTTTCCGAATTCATTATCGCTGGCGATAATCTCGTTTCTAAATGTCCCACTTGGTCCTGGGAATCGGGTGAGCCAAGCAAGAGGAAGCCATATTTACCACCAGACAAACAATTCTTAATTACTAGAAATGTGCCCTGTCTTCGAAGAGCTGCATCTGTCGAAGAAGAATATGAAGCTGCTGGAGGGGAGGTTCTACTTGATGATGAAGATAATGATGGATGGTTAGCCACTCATGGGAAACCTAAAGAAACCAAATTTGATGAGGATGAGAATTTACCTTCCATGGAAAGCCTGGAAATCAGCAAAAAGAGTTCTATTAAGCAGATTTCTTCCTACATGGGAGGTGATGAAGAAGATGATATTCCAGATATGACAGAGTTTGAAGAAACAGACAACATTATTGAAACAGATCCTGCCACTCTTCAGTGTACGTACCTAGTAGCTCATGAACCTGACGATGATAATATTCTTCGAACCCGAACATATGATGTCAGCATCACGTATGATAAATATTACCAAACACCTCGAGTATGGCTTACTGGGTATGATGAGTCGAGGATGCTTTTGCAACCAGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCACACAAAACGGTAACGATTGAAGACCACCCTCACTTACCTGGGAAGCATGCATCTATACATCCATGTCGGCATGGAGCAGTGATGAAGAAAATCATTGACGTGTTAATGTCGCGTGGAGTTGAGCCTGAAGTTGACAAGTACCTTTTCTTATTCTTGAAATTCATGGCCTCAGTAATTCCAACAATAGAGTATGATTACACCATGGACTTCGATGTTGGCAGCTCCAGCAGTTGA 945 0.4254 MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGEPSKRKPYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKFDEDENLPSMESLEISKKSSIKQISSYMGGDEEDDIPDMTEFEETDNIIETDPATLQCTYLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAHKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDVGSSSS 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0025 314 Gene3D - 153 299 - -
Lal1g0025 314 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 308 IPR007135 GO:0019787
Lal1g0025 314 Pfam Autophagocytosis associated protein, active-site domain 37 303 IPR007135 GO:0019787
Lal1g0025 314 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 308 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal1g0025 Lal-Chr1 203450 209315 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0025 K08343 - gmx:100814257 575.474