Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0016 ATGTGGAGACGCGCAACAATCCAATCTTCATTTTCCTATCTCATCAATTCATCATCATCATCATCTATTTTCAAGCAACCCATCAACATCTTTTCTCATACTTTCACATCAACACCAATTCCCTTTCATCCCCAGGAGATGGATGGAATTCCCCCCAAACATATATCTCGCTTTATAACTTTTGTTTTAGGAGGCCCTGGTAGTGGAAAGGGTACACAGTGTGCAAAAATTGTTGAAACCTTTGGATTTAAGCATCTTAGTGCTGGAGATCTTTTAAGAAGGGAGATTGTTTCTGATAGCAAATATGGGTCAATGATTCTGACTACAATTAAAGAAGGAAGAATTGTTCCATCAGAAGTGACTGTCAAGCTGATTCTAAGAGAGATACAATCTAGTGACAATCTTAAGTTTCTTATTGATGGTTTCCCCAGAAGCGAGGAGAATCGCATTGCTTTTGAACAAATTATTGGAGCAGAACCAAATATAGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGGGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAATATAGATACAATCAAGAAACGTCTTAAAGTATTTGAGGCATTAAATCGCCCTGTCATTGATCACTATGCAACGAAAGGGAAAGTTCACAAGATCAATGCAGTTGGAACGGTAGATCAAATATTTGAGCAAGTTCGGCCAGTTTTTGCGGCATTTGAGCACGACGCTGACTGGAAAGCTGTTTGA 747 0.3936 MWRRATIQSSFSYLINSSSSSSIFKQPINIFSHTFTSTPIPFHPQEMDGIPPKHISRFITFVLGGPGSGKGTQCAKIVETFGFKHLSAGDLLRREIVSDSKYGSMILTTIKEGRIVPSEVTVKLILREIQSSDNLKFLIDGFPRSEENRIAFEQIIGAEPNIVLFFDCPEEEMVKRVLSRNQGRIDDNIDTIKKRLKVFEALNRPVIDHYATKGKVHKINAVGTVDQIFEQVRPVFAAFEHDADWKAV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0016 248 PANTHER NUCLEOTIDE KINASE 59 241 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 PRINTS Adenylate kinase signature 61 74 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 PRINTS Adenylate kinase signature 89 103 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 PRINTS Adenylate kinase signature 137 153 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 PRINTS Adenylate kinase signature 184 199 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 PRINTS Adenylate kinase signature 201 215 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 59 236 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lal1g0016 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 234 IPR027417 -
Lal1g0016 248 Pfam Adenylate kinase 62 214 - -
Lal1g0016 248 Hamap UMP-CMP kinase [CMPK1]. 57 239 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lal1g0016 248 CDD ADK 61 228 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 Hamap Adenylate kinase [adk]. 58 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal1g0016 248 ProSitePatterns Adenylate kinase signature. 137 148 IPR033690 -
Lal1g0016 248 PANTHER UMP-CMP KINASE 59 241 - -
Lal1g0016 248 Gene3D - 55 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0016 Lal-Chr1 181616 185042 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0016 K13800 - gmx:100777369 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0016 1 181616 185042 Lal1g0016 1 181616 185042 ECH