Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1487 ATGGATCATCATCATCATCATCCTTATCATGGTGAATGGCGCCCTACTCGACCATCCCAATTTCAATTCCAATTCCAATTCCATGATTTATGTCCTACTTGCTCTTTCTCTCATTTCCCCTTTTGTCCTCCTCCTCCTCTTCCACAACAACCACAACCACCACCTCCACCTCCACCTCCACCTCCCTATTTTCATCCACCACTCCCTCCTCTTCCTTATCCCCTCACCAACCCTAATTACCCTAACCTTACTGCCACCGACGCCGCCAGAACCTCCAACAAGAGACCACGCATCGTCGACGATGAGAATGAGCGTAGAAGATTGAAGCTCATTCGGGATCACGGCGTCGCTCTTCCTCATTCGAATTCTCCTTATCACCACTTACCTTCTAATGGATTTCATTCTAATCTCGATCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTTTCATCCCTCCTCTTCCACCATCTCAACCACAACCTCCTCCACCTCCTCCGCCTCCGTCTCATTCTTCTCACTTCAAACCTTCTTCTCTTTTTCCACTTCCTCCTACTTCCTCTCCTCTCCCTCCTCCTCCTCCTCCTCCTTCATCATCATCATATTCACAATCTCGCACTTATTTTCACACCAATCCCTCTCCACCTTCTCAATTTCACACTCCTAACCAGCATTTTCAGCAACAACACTCCAATCACCACTACTCGCCAGATGCTCCTCAATCATTTTCACTCAACAATTTGCCTCCTCAGAAACCTAAATCCATGGATGCTTCACAACTATTTCGCCATCCGCATCGCACTTCCCGTCCTGATCATTTTGTTATTATCCTTCGTGGTCTTCCAGGTAGTGGTAAGAGTTACTTAGCAAAGATGCTGCGTGACATTGAGGTTGAAAATGGCGTTGATGCTCCTCGAATTCATTCTTTGGATGATTATTTCATGACCGAGGTTGAAAAGGTTGACGAAAATGATGCATCAAAATCTTCAAAGTCAGGCAGAAACAAAAAGCCTGCAACAAAGAAGGTCATGGAGTATTGCTATGAACCTGAAATGGAGGAGGCGTATCGGTCAAGCATGTTGAAATCATTCAAGAAAAATGTTGAGGAGGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGGTACGAAGTTTACATTTTAGAAGCTACTTACAAAGATCCTGCGGGTTGTGCGGCCAGGAATGTCCATGGGTTTACACAAGAAGACATAGAAAAGATGGCTGGGCAATGGGAAGAAGTTCCATCCTTGTATTTGCAGCTTGATGCAAAGTCATTATTTCATGGAGATGATTTAAAGGAAAGCAGAATCCAGGAGGTAGACATGGATATGGAAGATGATCTTGGTGACATTTTACCTGCAGTCGAAGGAAGAGAAGCTGAGAAAGTTATTTACCCTCCTATCAGGGTTGATGCAAGTAGTTCTTTAAAGGGTGAGAAGAGATGGGATGCTGAAGGGGAACATCCAATAGAAGCCAGGGAATTGGGTAAAAGCAAGTGGTCAGATGATTTCAGTGAATATGACACTGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTTTCTGGGTTAATTCATCATTATGGCAAGGAACGAAAATCTGTACATTGGGGTGATGAGGCTGGCCATACTGGGTTTTCAATAGGTGCTGCAAGGAAGGTAAATGCTTTATCTTTGGTGATTGGACCTGGTGCTGGATACAACCTGAAGTCAAATCCATTACCTGAAGAGGAGAGTTCAAGGCGCAATAGTGTGGAGCCAAGAAGGCACAACGTCTTTCAAGAACAAATACGAGCTGAACATGAATCTTTCAAAGCTGTTTTTGACAGGAGACGACAAAGGGTTGGTGGACTTGATGTGGAAGAGGAATGA 1953 0.4419 MDHHHHHPYHGEWRPTRPSQFQFQFQFHDLCPTCSFSHFPFCPPPPLPQQPQPPPPPPPPPPYFHPPLPPLPYPLTNPNYPNLTATDAARTSNKRPRIVDDENERRRLKLIRDHGVALPHSNSPYHHLPSNGFHSNLDLSSSSSSSSSSSSFFIPPLPPSQPQPPPPPPPPSHSSHFKPSSLFPLPPTSSPLPPPPPPPSSSSYSQSRTYFHTNPSPPSQFHTPNQHFQQQHSNHHYSPDAPQSFSLNNLPPQKPKSMDASQLFRHPHRTSRPDHFVIILRGLPGSGKSYLAKMLRDIEVENGVDAPRIHSLDDYFMTEVEKVDENDASKSSKSGRNKKPATKKVMEYCYEPEMEEAYRSSMLKSFKKNVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTQEDIEKMAGQWEEVPSLYLQLDAKSLFHGDDLKESRIQEVDMDMEDDLGDILPAVEGREAEKVIYPPIRVDASSSLKGEKRWDAEGEHPIEARELGKSKWSDDFSEYDTDQTEGMKGNINALSGLIHHYGKERKSVHWGDEAGHTGFSIGAARKVNALSLVIGPGAGYNLKSNPLPEEESSRRNSVEPRRHNVFQEQIRAEHESFKAVFDRRRQRVGGLDVEEE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1487 650 MobiDBLite consensus disorder prediction 155 175 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 184 202 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 594 617 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 203 256 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 137 154 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 137 261 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 45 77 - -
Lal19g1487 650 MobiDBLite consensus disorder prediction 602 617 - -
Lal19g1487 650 Gene3D - 276 442 IPR027417 -
Lal19g1487 650 MobiDBLite consensus disorder prediction 45 105 - -
Lal19g1487 650 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 3 148 IPR026314 GO:0005634
Lal19g1487 650 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 217 640 IPR026314 GO:0005634
Lal19g1487 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 275 449 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1487 K17602 - gmx:100775851 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1487 19 17306706 17323290 Lal19g1487 19 17306706 17323290 ECH