Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1482 ATGTCTAAGGTATCACCATACTTGTTGTTATGTTTAATGTTGGGGCTTTTGCTCCTTTGTGAGGCTCATGAAAATGAAGCGAATAAGATTAGATTTTATGAACTGAAAAGAGGCAATTTGCATCTCAATTTTACAAACTATGGTGCTACCATTCTCTCTGTCAGGGTCCCTGATAAACATGGGAAAATAGCAGATGTTGTTCTTGGCTACGATACCATCAACGCTTATAAGAATGATACATCTTACTTTGGTGCTCTTATTGGACGTGTGGCAAATAGAATTGGAGGAGCTAAATTCATTTTGGGTGGCAAAACTTACAAATTGCCTTCAAATGATCATGGGAACACACTCCACGGTGGTACCAGAGGGTTCAGTGATGTTTTATGGAAAGTACAATCCCACAAGAAACACAGTCACGTAACATTTACATACCACAGTTTTGATGGTGAACAAGGCTTTCCTGGAAAACTTGATGTCTCTGTGACTTACATGTTTATTGGAAAAAACAAATTGGGAGTGAGAATGACCGCCAAACCGATAGACAAAGCCACACCAGTGAATTTAGCACAGCATACTTACTGGAATCTGAGGGGACATAACAGTGGTGACATTCTTTCTCACACAGTTCAGATTTTTGCATCACAGATCACACCAGTTGATAAGAATCTTATCCCCACTGGTCAACTCCAATCTGTTAAGGGCACACCATATGATTTCCTTGAACCAAAAGAAGTCGGAAGCCGAATTCACAAGCTTCCTGGTCTATATGACATTAACTATGTGGTGGACAAAAGTAGCAAAGTGCACTTTAACAAGGTGACTATTGTGAAAGATCCTGTCTCTGGAAGGAAAATGGAGCTCTGGTCAAACCAACTTGGTGTGCAGTACTATACTAGTGGCATGTTAGGTGATACCAAGGGCAAGGATGGGGCCTTGTATCACAAGTATGCTGGCATTGCCTTGGAGACACAGGGTTTCCCAGATTCTGTGAACCACCCAAATTTCCCATCCCAGATTGTGAAGCCCGGGGAGATATACAAGCACTACATGATTTACAGATTCACAGCAAGCTAA 1074 0.4143 MSKVSPYLLLCLMLGLLLLCEAHENEANKIRFYELKRGNLHLNFTNYGATILSVRVPDKHGKIADVVLGYDTINAYKNDTSYFGALIGRVANRIGGAKFILGGKTYKLPSNDHGNTLHGGTRGFSDVLWKVQSHKKHSHVTFTYHSFDGEQGFPGKLDVSVTYMFIGKNKLGVRMTAKPIDKATPVNLAQHTYWNLRGHNSGDILSHTVQIFASQITPVDKNLIPTGQLQSVKGTPYDFLEPKEVGSRIHKLPGLYDINYVVDKSSKVHFNKVTIVKDPVSGRKMELWSNQLGVQYYTSGMLGDTKGKDGALYHKYAGIALETQGFPDSVNHPNFPSQIVKPGEIYKHYMIYRFTAS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1482 357 Gene3D - 21 356 IPR014718 GO:0030246
Lal19g1482 357 PIRSF GALM 20 357 IPR015443 GO:0016853|GO:0019318
Lal19g1482 357 PANTHER ALDOSE 1-EPIMERASE 10 357 - -
Lal19g1482 357 Pfam Aldose 1-epimerase 33 353 IPR008183 GO:0005975|GO:0016853
Lal19g1482 357 CDD galactose_mutarotase_like 33 354 - -
Lal19g1482 357 PANTHER ALDOSE-1-EPIMERASE 10 357 - -
Lal19g1482 357 SUPERFAMILY Galactose mutarotase-like 26 354 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1482 Lal-Chr19 17279742 17282132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1482 1 356 Miscellaneous Gene Families AT3G47800 60.955 4.16e-166 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1482 K01785 - gmx:100806956 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1482 19 17279742 17282132 Lal19g1482 19 17279742 17282132 ECH