Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1453 ATGGCTGCTTTTGTTCTTTCACTCCTTCTTTTGGCCTTCTTCACACCCTCCTCAAGTGGGTCTTGGTGCGTTTGCAAGGATGGGAGCGACACAATACTGCAGAAAACGTTGGACTATGCTTGTGGAGCAGGTGCTGACTGTAACCCTCTCCATCAAAACGGGCCTTGTTTCCAACCTAACACTGTAAGGGCTCATTGCAACTATGCTGTCAATAGCTATTACCAAAAAAAGGGTCAAGCTCCTATGTCTTGTGATTTTGCTGGATCAGCCACTGTTACTGCATCTGACCCCAGCTCTAGTGGTTGTGCATACCCATCAAGCGCCAGCAGTGGAGGCACTAGCACAACTCCTGTGTCAACTACACCAACCATGGGGATGAACCCTACCACTGGAACACCATCAACAACCACTGGCTCCAGCAGCAGCAGTGGTAGTACTCCATATGGTACCACCCCTGGTGTATTAGGAGGGATTGGCACTGGTATGGGGCCTTCAGGATCTGGCATGAACACTGATGAAAATCATGGTGGCCATAGACTTGTTGACACTAGTTTGTTCTCTCTATTTTCATTTGCACTCTTTTCTGGTGTTGAACTTGAGATTGAGTGCTTAACTGCTTATGATGTTGCTATGGTCTTATCTTTTATCTGTATATCAATTGTTTTTAAAAAATGGCTTCAACTGTTCCTATGCTATACATATGAAGAAGAATTCCAATGCTATACATATGATTCAAGACAGTGA 744 0.4489 MAAFVLSLLLLAFFTPSSSGSWCVCKDGSDTILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYYQKKGQAPMSCDFAGSATVTASDPSSSGCAYPSSASSGGTSTTPVSTTPTMGMNPTTGTPSTTTGSSSSSGSTPYGTTPGVLGGIGTGMGPSGSGMNTDENHGGHRLVDTSLFSLFSFALFSGVELEIECLTAYDVAMVLSFICISIVFKKWLQLFLCYTYEEEFQCYTYDSRQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1453 247 Pfam X8 domain 22 91 IPR012946 -
Lal19g1453 247 MobiDBLite consensus disorder prediction 103 174 - -
Lal19g1453 247 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 193 - -
Lal19g1453 247 PANTHER BETA-1,3 GLUCANASE 1 193 IPR044788 -
Lal19g1453 247 SMART X8_cls 21 104 IPR012946 -
Lal19g1453 247 MobiDBLite consensus disorder prediction 103 150 - -
Lal19g1453 247 Gene3D - 17 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1453 Lal-Chr19 17102279 17105081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1453 15 105 Glycoside Hydrolase AT4G34480 47.368 5.70e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1453 - - gmx:100500078 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1453 19 17102279 17105081 Lal7g1358 7 18718325 18721036 ECH
Lal19g1453 19 17102279 17105081 Lal19g1453 19 17102279 17105081 ECH
Lal14g1888 14 18314882 18318673 Lal19g1453 19 17102279 17105081 LSH
Lal7g1358 7 18718325 18721036 Lal19g1453 19 17102279 17105081 LSH