Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1449 ATGGCACATTCATCTTCTATCATCGATTCTCTGGGTGAAGAAATCGTGAGAATCATCACTCCTGTTTCTATCTGCATGTTCCTGGTCGTTATCCTCGTTTCTATTCTCAACACTAACTCCTCTTCTTCCTTCTCTGTTTCCAGCATAGCCACCATTGCATATTCCGAATCCACTTCCGATTCCATTTGGGACAAATTCATCGGTGCTCTTTTCAATTCCCTCGCTTTCGTCTTCTTTGTTACTCTCGCTACTTTCATCTTAGTCCTTCTCTTCTATTTCCGATGCACCAGGTTCCTCAAACTCTACATGGCTTTCTCTGCTTTCGTTGTTTTAGGTTTCCTCGGTGGTCAAATCTCTCTCTTTCTTATTCAGCATTTTGATACTCCTATTGATTCCATTACTTTTTTAATTGCTTTGTTTAATTTTTCTGTTGTTGGTGTTGTTGCTGTGTTTATGTCCAAAATGCCAATTATTGTCACTCAAGGCTATTTGGTTGTTATTGGAATATTGGTAGCTTATTGGTTTACCATGTTGCCTGAATGGACTACATGGTCTATGCTTGTTGCTATGGCTTTGTATGACCTTGCTGCTGTTCTTTTACCTGTTGGTCCTTTAAGGCTTTTGGTTGAGCTTGCTATATCCAGAGATGAAGAGATTCCCGCTTTGGTTTACGAGGCTAGGCCTGTTAACCATCATAGTTTCCATGCCAGGACGGATGCTGTCACTCAGAGGAGGATGTGGAGAGATAGGAGGATCGATGATCATGATGATGATTCTAATTTGAATGTTAACTCTGTGTTCGCTCATGGTCATGGCCTTAATCATGAGTTCAACTCGAATATGGATGAAGAGAATGTTTTGACTTCAAATTCAAACACCAATCACCTGGATAGAATACATGGTGACATAAACTTGGCTAGGGAGAATGCTTCTTCAAATTCAAATTTGAATTCTAATTCATTTTATGACAGAAATTTGGTCACAGTAGAAGAGGGACAGGTTCAAGAAACTAACGCAGACATTTCTACTCCGTTGATTGATCATGGAGTGACTGTCAGGCTCCATGGAGTAGAGGATTCCGCGTCGAGTGAAAATTTAATGCTAGAGGGAATTGGATTGGGCTCATCTGGTGCAATCAAGTTAGGCTTGGGTGATTTTATTTTCTACAGTGTTTTGGTCGGAAGAGCAGCAATGTATGATTTTATGACGGTGTATGCATGTTATCTCGCTATCATTGCTGGTCTCGGTGTAACTTTGATTCTTCTGGCCGTATATCGGAAAGCCCTGCCTGCTCTTCCTGTTTCAGTTGCACTAGGTCAGGGGTTATATTGCTTGAGCTTGGAATCTGTCTACAAAATTATTCCATGA 1368 0.4086 MAHSSSIIDSLGEEIVRIITPVSICMFLVVILVSILNTNSSSSFSVSSIATIAYSESTSDSIWDKFIGALFNSLAFVFFVTLATFILVLLFYFRCTRFLKLYMAFSAFVVLGFLGGQISLFLIQHFDTPIDSITFLIALFNFSVVGVVAVFMSKMPIIVTQGYLVVIGILVAYWFTMLPEWTTWSMLVAMALYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPVNHHSFHARTDAVTQRRMWRDRRIDDHDDDSNLNVNSVFAHGHGLNHEFNSNMDEENVLTSNSNTNHLDRIHGDINLARENASSNSNLNSNSFYDRNLVTVEEGQVQETNADISTPLIDHGVTVRLHGVEDSASSENLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGVTLILLAVYRKALPALPVSVALGQGLYCLSLESVYKIIP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1449 455 PANTHER PRESENILIN 5 446 - -
Lal19g1449 455 PANTHER PRESENILIN 5 446 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal19g1449 455 Pfam Presenilin 12 450 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal19g1449 455 PRINTS Presenilin family signature 19 29 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal19g1449 455 PRINTS Presenilin family signature 177 184 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal19g1449 455 PRINTS Presenilin family signature 194 211 IPR001108 GO:0004190|GO:0016021|GO:0016485
Lal19g1449 455 Gene3D Presenilin 369 453 IPR042524 -
Lal19g1449 455 SMART psh_8 67 450 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1449 Lal-Chr19 17084667 17086115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1449 4 446 Miscellaneous Gene Families AT1G08700 46.087 9.34e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1449 K04505 - gmx:100780823 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1449 19 17084667 17086115 Lal19g1449 19 17084667 17086115 ECH