Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1433 ATGTGTGCGAATGCAATTGAACAGAATAACCCGTTGGTGATGGATCTATGGAACAGAGCTAGAAGCTTCGTGGAAGAAACAACGAAGGGAGTTAATAAACAATCTCAACACCTTTCATTTGCCACTTCCAAATTCACCGATATCATCGTTGAGACAAAGGAAATCGCAACCCAAGCTTCTAAGCAAATCAAGCACTTCGCTGAAGCGGTTACCGTTAATCCCAATCAAGATGATCAGATTCTTGATCTTCACACTTTTGGAATCACAGAGGAGTTGAGAGAGTTTGTTAAAGGGATTACCGTCACCACATTCCGAGATTTCCCTATTCAAGATGATACACATTTGTCTGATGTTCCTACAGTTTCAAATGTTAGACAGGATCTAACTGAGTGGCAGCAAAAACATGCCAGTCTTGTTCTTTCTACCGTCAAGGAAATTTCAAAATTGAGGTATGAGCTGTGTCCACGTGTCATGAAGGAGAGGAAGTTTTGGAGAATATACTTTATACTTCTGAATAATCATATTGCACCCTATGAAAATCAATACATAGAAGATGCTAAACTAAAATCATCTGAACAAGTAAAGGATCATGAAGTGATGGAACCATCAAAAGTTGAATTGACCTCTAATCAAGAAGAGGTTCTGAAAGTGAAAAAAGAGACCAAAACTTCAACTTCGTCAACTGAGAAAGACCTTGATGTATTTCTTCTGGGAGATACCGGAGACAGTGACAATGACAATGATCCAGATGACGGCGATGGAGACTTTGATGATGATTTGGACAAACTGATGGATAGTTCGGATGATGAGAAAGGGAAATCATAG 825 0.3927 MCANAIEQNNPLVMDLWNRARSFVEETTKGVNKQSQHLSFATSKFTDIIVETKEIATQASKQIKHFAEAVTVNPNQDDQILDLHTFGITEELREFVKGITVTTFRDFPIQDDTHLSDVPTVSNVRQDLTEWQQKHASLVLSTVKEISKLRYELCPRVMKERKFWRIYFILLNNHIAPYENQYIEDAKLKSSEQVKDHEVMEPSKVELTSNQEEVLKVKKETKTSTSSTEKDLDVFLLGDTGDSDNDNDPDDGDGDFDDDLDKLMDSSDDEKGKS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1433 274 MobiDBLite consensus disorder prediction 243 264 - -
Lal19g1433 274 Gene3D BSD domain 102 185 IPR035925 -
Lal19g1433 274 MobiDBLite consensus disorder prediction 211 227 - -
Lal19g1433 274 PANTHER BSD DOMAIN-CONTAINING PROTEIN 75 270 - -
Lal19g1433 274 PANTHER BSD DOMAIN-CONTAINING PROTEIN 14 71 - -
Lal19g1433 274 SMART wurzfinal6 123 175 IPR005607 -
Lal19g1433 274 Pfam BSD domain 130 175 IPR005607 -
Lal19g1433 274 ProSiteProfiles BSD domain profile. 123 175 IPR005607 -
Lal19g1433 274 MobiDBLite consensus disorder prediction 194 274 - -
Lal19g1433 274 PANTHER BSD DOMAIN PROTEIN 75 270 - -
Lal19g1433 274 PANTHER BSD DOMAIN PROTEIN 14 71 - -
Lal19g1433 274 SUPERFAMILY BSD domain-like 87 179 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1433 Lal-Chr19 16991178 16995592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1433 15 244 EF-hand Containing Proteins AT1G69030 41.319 7.74e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1433 - - lang:109353934 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1433 19 16991178 16995592 Lal19g1433 19 16991178 16995592 ECH