Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1419 ATGGATTCTGACGAAGATGATTTTGTGTTTTACGGAACGCCGATACAGCGCGAAGAAGACCTAACTAGCCGCAAAAAGAAGGCCATTGCCGAGTCCTCCGCTCAGCTCCGAACCCTTCCTGCTTGGAAGCAAGAGGTTAGAGATGAAGAAGGGCGGAGAAGATTCCATGGAGCATTTACAGGAGGTTATTCTGCTGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCTCAGTCTTTTACCTCATCCAGGAAGAACAGAGCTGAAGTCAGACAACAGGACATACTGAATTTTCTAGATGATGATGAGAAAGCTGAATTGGAAGGTCGGTTTCTGGGGATGTCTTCACAGTTTGACACATTTGGTTCCACAGCTGCTGAAGTTGCTCGCAAAGAAGCTGAGAAGGAACAAAAACAGAGGCCGTCCATTATCCCTGGACCCGTTCCCGATGAAATAGTTCTTCCAGCAACGGAGTCTGTTGGGGTAAAACTGCTCTTGAAGATGGGATGGACTCGTGGTCGCTCAATTAAGGATTCACACGCTGATGCACTCTATGATGCCAGAAGACAAGGCCGAAGAGCTTTATTAGCATTTTCATCAGATGACCCAAAAGTGAAAATTTCTGGGTCTGAGCCAATCAAGGATGATAGCGAAATTTTTCCCGAGCCATCTGTGAATGATGATATCCAGTCTGCTAAGAGCACACCAGTTTATGTACTGAATCCAAAGCAAGACCTGTATGGTTTAGGCTTTGATCCTTATAAGTATGCTCCTGAGTTTAGAGAGAAAAAGAGATCCCGCATATCCAGCAAGATGGGGTCTGGGTATAGCAAAAACTTTTCTTCAAGGGATAGTCTTTTTGGTTTAAAGTCAGGAAAGAGTGCCCCTGGTTTTGGCATTGGAGCACTTGAGGAGCTTGATGTCGAGGATGAGGATGTCTATGCCACTGGTTTTGAATTTGAAGACACTTATGTTCAAGAAGTTGAGGAACCTGCCAAGTTGAGCTTGGAGTTTCAGAAAAAGAAGGATCAAAAGGACCAGGGTAATCTACCTGGCTTTAGAGTTGCATCCAATTCTGACTATCAAATGGAAAGATTTGAGGCTCCTCTGATTCCAAAGGATTTTGTGCCCCACCATGCATTTTCTGGACCTCTTGAGATTAACCACAAGAACCATGGTATCCCTCCACCAGATGTTCCTGCTCCCGAGGATAGCAATTTAAAAATATTAATTGAGGGGGTTGCAAATTTGGTAGCTAGATGTGGTAAATTGTATGAGGATCTATCTAGAGAAAAGAACCAGTCAAATCCATTGTTTAATTTTCTTTCCGGTGGAACTGGCCATGAGTATTATGCAAGGAAACTGTGGGAGGCACAACAGAAATGCATTGATCAGCCCAAGCAGCAGTTAGATGAAAAAGTACCTCCAGGTGTGAAGAGACTGACAGCTGAGAGCCGAGGCCAGATCTTAGGGGAAAGACCCCTAGAAAGAAGCTCCCAAGATCCATCATCATCTGATGCTTCTACTGATGTCCAACTCCAATTTCATCTCACAGATACATTTATCAAGTCTGCTGCATCATTTAGTGAGATACCGGATTCTGAAAGACCTTTCAAGAATGATCCTGCAAAGCAAGAAAGATTTGAGCAGTTTCTCAAGGAGAAATATAAAGGTGGATTACGCTCTACAAGTTCTAGTTTAGCTGGTGATATGTCAGAAGCTGCTCGTGCTCGGGAGAGGCTAGATTTTGAGGCTGCAGCTGAGGCAATAGAAAAGGGGAAACATGGCAAGGGAAACAAGCTTTTAATTCCATCTTCCATGGATTTTATCCCTGGTGGTGTTATGCAGTTTACTTCTGGTGCAGCAGAGCCAAAGAAAGACCTGCAAACTGAAGATTTAATGGGTAAGATGTACCCAAAGAGGGAAGAGTTTCAATGGCGTCCTTCATCTCTTCTCTGCAAACGCTTTGATCTCATTGATCCTTATATGGGGAAGCCACCACCTGCTCCACGGATTAGGAGTAAGATAGATACATTGATTTTTACATCAGATTCAGTCAAAAGTAACAAAGTGGAAAAGCCTATTGCTGCGAAGCAAGACATCTCCCATGTGCAAGAAACTGTTAATCAAGACATATCCAAAAGTATAGCTGAAAATGAAGCTGAAGTGGATGTGGAAGTTGAAAATATTGAAAGGCCGGTTGACCTCTACAAGGCTATTTTCTCTGATGATTCAGATGATGAAAGGGAAGAGTTAAATGTTAAGAAAACGGAGAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCACTGAGTCGTTTGATTGCTGGTGACTTCCTGGAATCGCTGGGTAAAGAACTAGGGCTTGAGGTTCCTCCTGATATGCCTTACCCCACACAAATATCCAGGAATGCTGTCCTTCAGAAAGAAATTATCAACGAAAATGCAAGACCTGGCAACCTAATGGGTGAAAATAACAGTGAGATATCACAAAATCATGGTTTGCCAAATGATCAGGACATTGCTCATGAGAGTGGACCCTCCAAAGTTGATACGATTTATGGAAATATGCTTGAGAGTGGTAGTACCAAAACGAAGGGAACTAATATCTCTAACAGCAAATTGAGTAGGTCTAACAGGGAGAATGGAGACGATGATAGGAAACTTAAATCACCTGTAACCAGCCACCGGGATTATAGCAGCAGTTTGTCATCCGAGGAGGAAAGGAAAAGAAAACGCCCCAGGCATCACCGACATAGGAGGCGTGATGCAGGAAGTGATTCATCCAGTGGTGATGAAAGAGATCATCACAGTTCAAGGTCCAAAGGGAGAAAGAAAGGGTCTTCTGAAGAAAAAAGCAGGGGAAGTAGAAAACATTCAAAACATCACAAGCACCGTAGGCATGAATCACCAAGTAGGTCATCTCATCATAGCATGGAGAAGGATGATACTCATCCCAGAAAAGAGAAAAAGCGGAGGTGA 2988 0.4337 MDSDEDDFVFYGTPIQREEDLTSRKKKAIAESSAQLRTLPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFTSSRKNRAEVRQQDILNFLDDDEKAELEGRFLGMSSQFDTFGSTAAEVARKEAEKEQKQRPSIIPGPVPDEIVLPATESVGVKLLLKMGWTRGRSIKDSHADALYDARRQGRRALLAFSSDDPKVKISGSEPIKDDSEIFPEPSVNDDIQSAKSTPVYVLNPKQDLYGLGFDPYKYAPEFREKKRSRISSKMGSGYSKNFSSRDSLFGLKSGKSAPGFGIGALEELDVEDEDVYATGFEFEDTYVQEVEEPAKLSLEFQKKKDQKDQGNLPGFRVASNSDYQMERFEAPLIPKDFVPHHAFSGPLEINHKNHGIPPPDVPAPEDSNLKILIEGVANLVARCGKLYEDLSREKNQSNPLFNFLSGGTGHEYYARKLWEAQQKCIDQPKQQLDEKVPPGVKRLTAESRGQILGERPLERSSQDPSSSDASTDVQLQFHLTDTFIKSAASFSEIPDSERPFKNDPAKQERFEQFLKEKYKGGLRSTSSSLAGDMSEAARARERLDFEAAAEAIEKGKHGKGNKLLIPSSMDFIPGGVMQFTSGAAEPKKDLQTEDLMGKMYPKREEFQWRPSSLLCKRFDLIDPYMGKPPPAPRIRSKIDTLIFTSDSVKSNKVEKPIAAKQDISHVQETVNQDISKSIAENEAEVDVEVENIERPVDLYKAIFSDDSDDEREELNVKKTENQEKKAEVANTALSRLIAGDFLESLGKELGLEVPPDMPYPTQISRNAVLQKEIINENARPGNLMGENNSEISQNHGLPNDQDIAHESGPSKVDTIYGNMLESGSTKTKGTNISNSKLSRSNRENGDDDRKLKSPVTSHRDYSSSLSSEEERKRKRPRHHRHRRRDAGSDSSSGDERDHHSSRSKGRKKGSSEEKSRGSRKHSKHHKHRRHESPSRSSHHSMEKDDTHPRKEKKRR 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1419 995 MobiDBLite consensus disorder prediction 818 995 - -
Lal19g1419 995 MobiDBLite consensus disorder prediction 880 896 - -
Lal19g1419 995 MobiDBLite consensus disorder prediction 821 840 - -
Lal19g1419 995 Pfam Surp module 412 459 IPR000061 GO:0003723|GO:0006396
Lal19g1419 995 MobiDBLite consensus disorder prediction 857 879 - -
Lal19g1419 995 MobiDBLite consensus disorder prediction 958 974 - -
Lal19g1419 995 Pfam Protein of unknown function (DUF1604) 39 112 IPR011666 GO:0006397
Lal19g1419 995 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 801 - -
Lal19g1419 995 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 873 995 - -
Lal19g1419 995 MobiDBLite consensus disorder prediction 209 229 - -
Lal19g1419 995 Gene3D Surp module 360 465 IPR035967 GO:0003723|GO:0006396
Lal19g1419 995 MobiDBLite consensus disorder prediction 975 989 - -
Lal19g1419 995 Coils Coil 747 767 - -
Lal19g1419 995 MobiDBLite consensus disorder prediction 925 957 - -
Lal19g1419 995 ProSiteProfiles SURP motif repeat profile. 412 456 IPR000061 GO:0003723|GO:0006396
Lal19g1419 995 SUPERFAMILY Surp module (SWAP domain) 393 462 IPR035967 GO:0003723|GO:0006396
Lal19g1419 995 MobiDBLite consensus disorder prediction 209 223 - -
Lal19g1419 995 SMART surpneu2 410 462 IPR000061 GO:0003723|GO:0006396
Lal19g1419 995 MobiDBLite consensus disorder prediction 469 511 - -
Lal19g1419 995 PANTHER BNACNNG56020D PROTEIN 1 801 - -
Lal19g1419 995 PANTHER BNACNNG56020D PROTEIN 873 995 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1419 K13123 - gmx:100796934 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1419 19 16895316 16905020 Lal19g1419 19 16895316 16905020 ECH