Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1417 ATGGCGAAGCCTCGTAAGCCTAAGAACGAAGACCCTAAAACCGATAATTCCGGTGCCCTAGTTCATCATCAGAAGCTATGTCTTTCAATCGATACGGATAAACGCCTTCTCTACGGGTATACTGAATTGGAAATTGCGGTACCTGAGATTGGGATAGTTGGTTTGCATGCGGAGAATTTAGGGATTGAGAGTGTTTGGGTTGATGGTGAACCTACTGAGTTCGAGTATTACCCGAATCATCAGCAACAATCTGAGGATGAGAACAGATGGAGCTCTGTTGATTCTCCTAGCTCTGCTGCTGATGCTGCTGGTTCACTTTACTTATCTGCTCTTGAGAAAGAGCTGGTTCCCAATTTACTCATTAATTGTTGTAAACCTTTTAAGATTGAAACTGAGCAGCAGGATCAACCCATTTCTGAAAATGGGTTTCCTTCATCTGCCAACAAGGCCAATCAGAATGTGAGATTGGTTCGTATTGACTATTGGATAGAGAAGGCAGAGACAGGAATCCACTTCAAAGATAATTTACTTCATACTGATAACCAGATAAGGAGAGCAAGGTGTTGGTTCCCTTGTGTAGATGACCATTCACAGCGATGCTGCTATGACCTGGAGTTCACTGTAGCACACAATCTTGTGGCTGTCAGTACTGGAAGGTTGCTATATCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACGTATGTGTATAAATTGGATGTTCCCGTTGCTGCAAGATGGATATCTTTGGCCGTTGCTCCGTTTTCAATTCTTCCTGATCACCAATATAGTTTCATATCACATATGTGTTTACTACCTAATCTGTCAAAGATGCGGTATACAGTGGAATTTTTCCATAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCGTTCGACTCATATAAGCAAGTTTTCATTGAGCCTGAGATGGCAGTTTCATCACTGAGTTTAGGAGCATCTATGAGTATATTTAGTTCTCAAGTTTTGTTTGATGAGAAGCTTATTGATCAGACTATTGATACAAGGATAAAACTTGCATATGCCCTTGCAAGACAGTGGTTTGGTGTGTATATCACCCCCGAGGCACCAAATGATGAGTGGCTCTTGGATGGGCTTGCTGGTTTCTTAACAGATTTTTTTATTAAGAAGCATTTGGGAAATAATGAGGCACGGTACCGGAGATACAAGGCAAACTGTGCTGTTTGCAAAGTTGATAGTAGTGGAGCAACATCTTTGAGCTGTTCAGCTTCTTGTAAGGATCTATATGGAACCCAATGCATTGGTTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCAGTTCTTCAGATGCTGGAAAAGCAGATGGGTCCTGAATCTTTCCGGAGAATTTTGCAAACTATTGTTTCTCGGGCTCAAGATAAATCACGTTCCACGAAAACTATTAGTACCAAGGAGTTTCGACATTTTGCAAATAAGGTTGGAAATCTTGAACGTCCATTTCTGAAAGATTTCTTCCCCCGGTGGGTCAGTTCATGTGGATGTCCTGTTTTAAGGATGGGGTTTTCCTATAACAAGAGGAAGAATATGGTTGAATTGGCCGTGTTGCGAGGATGCACAGCATTGCAGACTTCAAATACATCTGTCCTTGATATTAATCCAGATACTGAAAGTCGAGATGGAGATACTGGATGGCCTGGGATGATGAGTATCAGGGTATATGAACTTGATGGTATGTACGACCATCCAATTCTTCCAATGGCTGGAGAATCATGGCAACTATTGGAAATACAATGCCATTCCAAGCTTGCGGCTAGACGCTTTCAAAAGCCTAAGAAAGGTTTTAGAATTGATGGCTCTGATGATAATGGTGATGTGCCTTCCATGGATATGCGCTCCAGCACTGAGTCTCCTTTACTATGGGTCAGAGCCGATCCTGACATGGAGTACCTTGCCGATATTCATTTTAATCAACCTATTCAGATGTGGATTAATCAATTGGAGAAGGACAAAGATGTTATTGCTCAGGTGCAAGCAATTGCAACTCTAGAGGCATCCCCCCAACTATCATTTTCTGTTGTAAATGCCCTAAACAATTTTCTCACTGACTCCAAGGCTTTTTGGAGAGTACGGATCGAAGCAGCATTTGCATTGGCAAGTTCAGCATCTAAGGAAACTGATTTTGGTGGTCTTCTCCATTTGGTAAAATTTTACAAGAGTCGAAGGTTTGATCCAGACATTGGACTCCCAAAGCCAAATGATTTCTATGATTTTGCGGAGTATTTTGTTCTTGAGGCCATTCCACATGCTGTAGCTATGGTAAGATCTTCAGACAAGAAAAGCCCAAGAGAGGCTATCGAGTTTGTCTTGCAGCTATTGAAGTACAATGACAACAATGGGAACCCTTACTCAGATGTCTTCTGGCTTGCTGCATTGGTCCAGTCGGTTGGCGAGCTTGAGTTTGGGCAACAGAGTATTCTCCTATTGTCATCGCTTCTCAAGCATATTGACCGGCTGCTACAATTTGATAGTCTCATGCCAAGCTACAATGGGATCTTGACTATCAGTTGTATCCGGACATTGGCTCAGATTGCTCTAAAGCTATCAGGATTTGTTACTCTTGATCGGGTATATGAACTGGTAAAACCTTTTCGGGACCTAAAGGCAATGTGGCAAGTTCGAATTGAAGCATGCAGAGCACTTCTTGATCTCGAATTCCACTGCAAGGGCATTGATGCAGCATTACTCTTGTTTATCAAATATGTAGAGGAGGAGCCTTCTTTAAGAGGGCAGTTAAAACTGGCCACTCATGTTATGAGGCTATGTCAGATGAAAGATGGATTGGACTCAAATGATGGAATTACAAGCCAAGCGCTTGTCTCTTTGCTTTGTTTACTGGAAGGGCGTATGGCTTTTAATAATGTCTTTCTCCGTCACTACTTATTCTGCATATTGCAAATACTTGCAGGAAGGACACCAACTCTACATGGAGTTCCCAGAGAAAATAGAACATTGCATTTGAGTCTTCCAGAAACTTGCAACTATCAAAGGAACGTATTTGTTCTTGATCCAGAAAGTAAACCTTTGGAACTGCCAAGCTCTACCCAAACCTTTGCACAAGATTTGGCCTTGACCGATGGTTTGAGGGGTGCAATTGATGAAGCTCCTAATGGTGCATCTTGTGAAGTTCCCAAACAAGCACATGTTGAAGCTCTGAAGGGGGCACCCCTTGAGGCTCCCAATGTGGTATTAACAGAAGTTCCTCAGGAAGCACCAATGGAAGCTCCCAATGGATTTTCCAAGGAAGCTGATACAGTATCCAATAGCCATGAACGAAAGAGGACAATTAAAATCAAGGTTAAACAATCTTCTGCCACCAGTCGGGCTGATACTGATAATCAAATAGTTGAACGCTCTATAGGTCGACGTAATGAAATGGACCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCCCAAAGGAATTTTGCTGAGACTCTGAGCGCTAGTAATCACAATATTGAGGAAGTTAATTCTTGGCATGATCGGGGTTCTCGCATGACTGCCAGTATTGGTAGTGCAAAAATTTTGAGTGATGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCTGATTCAAGTTTAGTTTATTCACAACCTCAGCCAGAAGATCCATCATCATCTAGCATTATTCAGGACTACAATATAGATGCTGATGCACGACGATATGCGAGCCTTCAAACTCTTTCAGCTGCAAGACTTGATGGAGAATCATTGGGTAAAGAAATTGTTCGTGAGAAAGAAAAGCAGAGAGGCAAGGACAAGAAACGAAAGCGCGACAATCATAAAGGGCGCCAAGATGATCCGGAATATTTGGAGCGAAAGCGATTGAAGAAAGAGAAAAAGCGCAAGGAAAAAGAAATGGCAAAACTGCTGAGTGATGTCCCAAAGAGACCTTCCGTAGACTTATCAAATAAGAAAGAGGAACCTGGAGTGAATGTAGCAAGACAACTGAAAGCTGTTGAATCCAGTGGATATAATTCTAAATTGGAAATAAAAAAGACTGATACCAAACCCGAGGCATCAGAAGGTACTCCTGGTGCACCAAAAATTCGAATTAGAATTAAAAATCATATCCTCAATAAGTCATAG 4143 0.4197 MAKPRKPKNEDPKTDNSGALVHHQKLCLSIDTDKRLLYGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPNHQQQSEDENRWSSVDSPSSAADAAGSLYLSALEKELVPNLLINCCKPFKIETEQQDQPISENGFPSSANKANQNVRLVRIDYWIEKAETGIHFKDNLLHTDNQIRRARCWFPCVDDHSQRCCYDLEFTVAHNLVAVSTGRLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFSILPDHQYSFISHMCLLPNLSKMRYTVEFFHSAFSCYKDYLSVDFPFDSYKQVFIEPEMAVSSLSLGASMSIFSSQVLFDEKLIDQTIDTRIKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKVDSSGATSLSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKSRSTKTISTKEFRHFANKVGNLERPFLKDFFPRWVSSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSNTSVLDINPDTESRDGDTGWPGMMSIRVYELDGMYDHPILPMAGESWQLLEIQCHSKLAARRFQKPKKGFRIDGSDDNGDVPSMDMRSSTESPLLWVRADPDMEYLADIHFNQPIQMWINQLEKDKDVIAQVQAIATLEASPQLSFSVVNALNNFLTDSKAFWRVRIEAAFALASSASKETDFGGLLHLVKFYKSRRFDPDIGLPKPNDFYDFAEYFVLEAIPHAVAMVRSSDKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKHIDRLLQFDSLMPSYNGILTISCIRTLAQIALKLSGFVTLDRVYELVKPFRDLKAMWQVRIEACRALLDLEFHCKGIDAALLLFIKYVEEEPSLRGQLKLATHVMRLCQMKDGLDSNDGITSQALVSLLCLLEGRMAFNNVFLRHYLFCILQILAGRTPTLHGVPRENRTLHLSLPETCNYQRNVFVLDPESKPLELPSSTQTFAQDLALTDGLRGAIDEAPNGASCEVPKQAHVEALKGAPLEAPNVVLTEVPQEAPMEAPNGFSKEADTVSNSHERKRTIKIKVKQSSATSRADTDNQIVERSIGRRNEMDHGASSSVSVDAPQRNFAETLSASNHNIEEVNSWHDRGSRMTASIGSAKILSDGDELVKELQCTADSSLVYSQPQPEDPSSSSIIQDYNIDADARRYASLQTLSAARLDGESLGKEIVREKEKQRGKDKKRKRDNHKGRQDDPEYLERKRLKKEKKRKEKEMAKLLSDVPKRPSVDLSNKKEEPGVNVARQLKAVESSGYNSKLEIKKTDTKPEASEGTPGAPKIRIRIKNHILNKS 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1417 1380 MobiDBLite consensus disorder prediction 1143 1157 - -
Lal19g1417 1380 Gene3D Neutral Protease Domain 2 264 511 IPR027268 -
Lal19g1417 1380 SUPERFAMILY ARM repeat 442 985 IPR016024 -
Lal19g1417 1380 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 19 1310 IPR037813 GO:0005669
Lal19g1417 1380 Gene3D tricorn interacting facor f3 domain 20 252 IPR042097 -
Lal19g1417 1380 Pfam Peptidase family M1 domain 280 480 IPR014782 GO:0008237|GO:0008270
Lal19g1417 1380 MobiDBLite consensus disorder prediction 1259 1368 - -
Lal19g1417 1380 MobiDBLite consensus disorder prediction 1117 1131 - -
Lal19g1417 1380 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 14 253 IPR042097 -
Lal19g1417 1380 MobiDBLite consensus disorder prediction 1278 1293 - -
Lal19g1417 1380 MobiDBLite consensus disorder prediction 1089 1157 - -
Lal19g1417 1380 CDD M1_like_TAF2 23 507 - -
Lal19g1417 1380 Coils Coil 1291 1311 - -
Lal19g1417 1380 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 274 516 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1417 K03128 - gmx:100792795 2327.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1417 19 16872145 16886859 Lal19g1417 19 16872145 16886859 ECH