Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1343 ATGTTGCGCTTCACGTCAAACTCAAACCCTTATTTCATTCTCATATTCTTCTCTATCGTTCTCTTTTCTGCAGAATCCTCCTCTCCTCTAACCATTCCAGAGATTGGTGATGGTGTGATTCCATGGAATGATTGGACATCAGGGGGGAAAGTTGGAAATGGAAAAACAATGGTTCTTGCAAAAGAAAGAACTTGCCGGAAAGATATATTCAACCATTTTCAACGTTACGACGGTGGATGGAATATCAGCAATACACGTTATGTTACGTCAGCTATTTCTACTGCGGTTCCTTTCTTTGGTGCAGCTGTAGTGTGGTTCGTGATTTTTGTGCTCTCTTTAAGCCTCATCTGCCTATGTTACTGCTGTTTTCCTGTAAAGGGTTATGGCTATTCTAAATCAGCCTATGCTCTCTCATTGATTTTACTCATCATCTTCACTGTTGCTGCAATAGCTGGAAGTGTTTTCTTGTACACTGGTCAAGGGAACCTTCTTGGAAGCACCTCAGACACACTTGATTTTGTTGTGAGTCAGGCTGAATTAACTACCCAAAGTCTCAAGAATGTGTCAGGTTACTTTGATATATCTAAGCAGATTGGACTTGGAGCTAATGTAGCACTTTTGCCATCAGATATTCAAGTGGGTATTGATCATGTTAAAATCCAAATCAAAACTGCTATTACTACTCTTTCTAAACAGACTGCAGAAAATTCAGACAAAATACGCCAAGGCATAGGTAGAATGGGATTGGCTCTTATGATTGTTGCTGCTGCTATGCTCTGTGTTGCATTCCTCGGATTCTTTTTTTCTGTACTTGGGTTGCGGTTTTTTGTATATTTCATGGTCATTGTTGGAGGGATTCTTGTTGCAGTCACATTTATACTTTGTGGTGGATTTCTGTTTCTTCATAATGTGATCGGCGATACATGTGTTGCAATGGATGAGTGGGTTCTGAACCCCACTGCTCATACAGCTCTAGATGAAATTCTTCCATGTGTTGATAACGCAACTGCTCAGGAATCCTTGATAAGAAGCAGGAATGTGACATATTCACTTGTTAACCTTGTTCAAATGTTCATTTCTGATGTCGCAAATGGAAATACCTTAATTTATGCATACAACCAATCAGGTCCTCTCATGCCTCTTCTCTGTAATCCATTTGCAGCCGATCTCACATTTCGGAACTGTGCTGCTGGGGAAGTTACTTTGGAAAATGCTATCAATGTTTTGAAGAATTATACATGTAAGGTTTCTTCATCAGGCAGTTGCATTACGCCTGGTCGAATGACCCCTATGATATACGCCCAAATGGCAGCTGCAGTGAACGTAACCTATGGTTTATATCGCTATGGTCCATTTCTTCAAGAATTAGTAGACTGCACTTTTGTAAGGAAAGCATTCACAAAGATAAGCAACAACTATTGTCCTGGTCTGAGAAGATTCACTGAGTGGATTTATATTGGACTAGTTGTGGTGACTGTAGCTGTAATGCTGTCCTTGATATTCTGGATCATCTTTGAAAGGGAGAAGAGGCATCGTCGCCGCACTAAAAGGTATATCAGTTCAGTCATTAACAAAAACAGTTATAAGCCGGTACAATAG 1599 0.4021 MLRFTSNSNPYFILIFFSIVLFSAESSSPLTIPEIGDGVIPWNDWTSGGKVGNGKTMVLAKERTCRKDIFNHFQRYDGGWNISNTRYVTSAISTAVPFFGAAVVWFVIFVLSLSLICLCYCCFPVKGYGYSKSAYALSLILLIIFTVAAIAGSVFLYTGQGNLLGSTSDTLDFVVSQAELTTQSLKNVSGYFDISKQIGLGANVALLPSDIQVGIDHVKIQIKTAITTLSKQTAENSDKIRQGIGRMGLALMIVAAAMLCVAFLGFFFSVLGLRFFVYFMVIVGGILVAVTFILCGGFLFLHNVIGDTCVAMDEWVLNPTAHTALDEILPCVDNATAQESLIRSRNVTYSLVNLVQMFISDVANGNTLIYAYNQSGPLMPLLCNPFAADLTFRNCAAGEVTLENAINVLKNYTCKVSSSGSCITPGRMTPMIYAQMAAAVNVTYGLYRYGPFLQELVDCTFVRKAFTKISNNYCPGLRRFTEWIYIGLVVVTVAVMLSLIFWIIFEREKRHRRRTKRYISSVINKNSYKPVQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1343 532 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 55 521 IPR040283 -
Lal19g1343 532 PANTHER TRANSMEMBRANE PROTEIN 55 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1343 Lal-Chr19 16302526 16308878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1343 - - gsj:114387485 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1343 19 16302526 16308878 Lal19g1343 19 16302526 16308878 ECH
Lal19g1343 19 16302526 16308878 Lal17g1386 17 15284942 15288553 PCT
Lal19g1343 19 16302526 16308878 Lal4g1406 4 18279050 18282581 PCT
Lal17g1386 17 15284942 15288553 Lal19g1343 19 16302526 16308878 PCT
Lal4g1406 4 18279050 18282581 Lal19g1343 19 16302526 16308878 PCT