Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1340 ATGGTTTACACTTACAACAACTACACACCCAAGTACTACTCAACTCTTCAAGACTCAATCACCTCATTGTGCAAAACCATTCTTCCTTTCAGCTTCAAAAAACGATCTTTACCTTCAGCAGAGTACAAGTTATCCAAACTTCAATCTGATAACCTTAAATGGCAGCAAGATTCATTCCATCAGGTTTTGAACTTGATGGGTCTTCATAAAGAAGGCATTGTTGCTGAAACTGAGCTTTCAGCTTTCAGAACTCACTTGCTTCATACCCTTATTGCTTCTCCTAATGAACAAGAACAGCCACTTATATTGAGAGATAAGCTCCTTTTTCTACAGGAACTCCTTTATGCCAAGTGCATTTGTGAAGAAGACTACCATTCTTATAAAAGGCCATTGCTACAGAGATTGGCAGTTCAAGGAGCTCAGATTGAAGCAAGAGATGTGATCATGGCAAGGACTAAAGACTCCAAAGAGAATTCAGAAGAAGAGTGGTCTGTGATTGACTTGAAAGATGAGAAATGCTTGGTGAACAAAGAAAGCTCAAATTCTAACAAGTATATTAAAGGAGCAGCCTCAGTTTTTGGCTTTGTTTCTTCTCACAAACATGGGATGGAAAAGAATATATTTGATTCAACTTCTTTGTCTAAAACAAATGAACAACAAAGTGAAGGTAGTTCAATTCTTATGGAGGAAAGTGGTCCTCCACAACCTTTGAAGGAAAGCAGTGGTCAAGACAAGTTGAAGAGGAAACCATTTAGGAGCTTGTTTCATAAGGAGCAGACAGAGTGTAATGGTGGTGGAGATGGTGGTTCTGAAGCAGAACAAAGAGCATGTAAATCAGTGAAAAGGCAATGGGGTTTTGAAGGGTTCAAAAAATGGAAGAGAAATGATTCAGATGATGAGATAGCTAATGAAGCTTACTCAGCTTCATCTCAGTCATTTGCAAGGGCACCTGGGGAGGGACCAGACACCAAGTTGATAAAGAAGAAGTTGCATTCTGATGGATCCCCGTCTGATTTTTTCATTGATAAGGTGTTGGGAGACAAGATTAAGAAGGAGCTGTCAAGAATTCAGACAGAACTGAGCAGCACAAACCCAAATCTTAAGTTTTCGAATGATCAGATTGAAGCAATTTGTACCAAAATTCCTGTGGACAAGGCTGAGTTGAAAAACTACTTTCCCAAATCATGGTGTGACCAATATGGTGATGTTGTGCTGGATGTGGTGAAGAAAGAATTCAAAGAGCATGTTGCAGAAATGGAAAACATGCGCAACATTGCCAGAGAAAAACATGGCAGCAGTTCAAGGCAGTGGGTAACATCTGAGGATGATGAAAACATTCATCCAAATCTTTTTGCTAATAATGATTATTCAGTTCATAGTAGTAACATCAATCCATTCTCCCATGGTTACTTCAAAGTGGAACTAAGCTGA 1431 0.392 MVYTYNNYTPKYYSTLQDSITSLCKTILPFSFKKRSLPSAEYKLSKLQSDNLKWQQDSFHQVLNLMGLHKEGIVAETELSAFRTHLLHTLIASPNEQEQPLILRDKLLFLQELLYAKCICEEDYHSYKRPLLQRLAVQGAQIEARDVIMARTKDSKENSEEEWSVIDLKDEKCLVNKESSNSNKYIKGAASVFGFVSSHKHGMEKNIFDSTSLSKTNEQQSEGSSILMEESGPPQPLKESSGQDKLKRKPFRSLFHKEQTECNGGGDGGSEAEQRACKSVKRQWGFEGFKKWKRNDSDDEIANEAYSASSQSFARAPGEGPDTKLIKKKLHSDGSPSDFFIDKVLGDKIKKELSRIQTELSSTNPNLKFSNDQIEAICTKIPVDKAELKNYFPKSWCDQYGDVVLDVVKKEFKEHVAEMENMRNIAREKHGSSSRQWVTSEDDENIHPNLFANNDYSVHSSNINPFSHGYFKVELS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1340 476 PANTHER OS09G0556800 PROTEIN 1 463 - -
Lal19g1340 476 MobiDBLite consensus disorder prediction 207 246 - -
Lal19g1340 476 Coils Coil 409 429 - -
Lal19g1340 476 MobiDBLite consensus disorder prediction 207 228 - -
Lal19g1340 476 MobiDBLite consensus disorder prediction 305 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1340 Lal-Chr19 16287398 16293292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1340 - - gmx:100819771 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1340 19 16287398 16293292 Lal19g1340 19 16287398 16293292 ECH
Lal19g1340 19 16287398 16293292 Lal4g1396 4 18190736 18194587 PCT
Lal4g1396 4 18190736 18194587 Lal19g1340 19 16287398 16293292 PCT