Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1234 ATGTCCTCTTTCTCTTCAGTTTCTTTTTTTGTCTTTTACTATCTTCTCCTTCATTTGCTAATATTTCATATTTTGATTTCAACACATTTTTCTCTCACTCTCACTGGAGCAACTGAACCCCATTTGATTTCTGAGAAGTGCCCTCTTCTAAAAATGTGGAATTTCTTATTAATCAAAGATGTCAGAAAGATTCTCAAGCGTAAAGATAGTGATGCCGGTGAAACGGGAAGAACTCTGGAGGACTTGAGAGCTTCTCTATTTAATGAATTCCATTCCTCAGAAGGTGCAAAACGTCCGCAGAAGCGCACAAGTGGTCCAGCTGCAGCACTGTTCTTTAATTTTCTGGTTGCAGTTGGCATCATTTTCATGAACAAAATGGTGCTTCAAACTGTTAAATTCAAATTCCCTATACTTCTCTCACTAATTCACTATGTAGTGAGCTGGTTCCTAATGGCTATACTAAATATGTTTTCTTTGCTTCCCGCATCTTCTTCCTCAAAGACAACTCACCTGTCTGCTTTGTTTAGTCTTGGATTTGTCATGTCTCTATCTACTGGTCTTGCTAATGTCAGCTTGAAGTATAATAGCATCGGTTTCTATCAGATGGCAAAGATTGCAGTTACACCTTCCATAGTCATGGCAGAATTCATATTATACAGGAAGAAGGTTTCTTGGACTAAGATTGAAATGCTTACTGTAGGAATTGAAACTTTACAGGCATTAGCGTTAACGGTGGTATCAATTGGTGTTGCTGTTGCTACAGTGACTGATCTGCAGTTCCATTTATTTGGTGCCTGTGTAGCATCGGCATGGATTGTACCTAGCGCTGTAAACAAAATCCTCTGGTCAAGACTGCAGCAGCAAGAGCACTGGACAGCTTTGGCGTTGATGTGGAAAACAACACCTATTACTTTAATTTTCTTGGCTGCTATGATACCCTGGTTAGACCCTCCAGGTGTATTTTCCTTTGATTGGAACCTCAGTAACATGTTTGTTATCCTCTCATCAGCTATCCTTGGATTCCTGCTTCAGTGGTCCGGTGCTTTAGCGCTCGGTGCTACATCTCCACTTTCACACGTTGTTCTTGGGCAGTTTAAGACATGCATTATCCTCCTGGGAAACTATTATCTCTTTGGATCCAATCCTGGCATAGTCAGTATCTTTGGTGCATGCACAGCTATTGCTGGTATGTCTGTTTACACTTACCTTAATCTGAAGCAGCATTCAAACAAGATATTTCCTGGCCATACCTCTACTTTACCAAAATCTAAACATGACAAAGAAAATGGCTGTGCCCATGATGGACATTACAGAGCAGAATCCGTCTAA 1329 0.4048 MSSFSSVSFFVFYYLLLHLLIFHILISTHFSLTLTGATEPHLISEKCPLLKMWNFLLIKDVRKILKRKDSDAGETGRTLEDLRASLFNEFHSSEGAKRPQKRTSGPAAALFFNFLVAVGIIFMNKMVLQTVKFKFPILLSLIHYVVSWFLMAILNMFSLLPASSSSKTTHLSALFSLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFILYRKKVSWTKIEMLTVGIETLQALALTVVSIGVAVATVTDLQFHLFGACVASAWIVPSAVNKILWSRLQQQEHWTALALMWKTTPITLIFLAAMIPWLDPPGVFSFDWNLSNMFVILSSAILGFLLQWSGALALGATSPLSHVVLGQFKTCIILLGNYYLFGSNPGIVSIFGACTAIAGMSVYTYLNLKQHSNKIFPGHTSTLPKSKHDKENGCAHDGHYRAESV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1234 442 MobiDBLite consensus disorder prediction 418 442 - -
Lal19g1234 442 PANTHER SOLUTE CARRIER FAMILY 35 65 419 - -
Lal19g1234 442 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 65 419 - -
Lal19g1234 442 Pfam Triose-phosphate Transporter family 112 400 IPR004853 -
Lal19g1234 442 MobiDBLite consensus disorder prediction 420 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1234 Lal-Chr19 15602346 15607170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1234 118 426 Organic Solute Cotransporters AT1G77610 24.062 1.08e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1234 - - pvu:PHAVU_003G139700g 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1234 19 15602346 15607170 Lal19g1234 19 15602346 15607170 ECH
Lal19g1234 19 15602346 15607170 Lal21g1215 21 15131741 15137140 PCT
Lal21g1215 21 15131741 15137140 Lal19g1234 19 15602346 15607170 PCT