Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1141 ATGACTACTGGTAGTTATATTGGAATCTCTACCATAAAGCCTTGTTCTAGAATCCTGAGTAGCTATAGAAGTTCATCGCTTTTTGGGTTTTCTCCAATTAAGTTTAATGGTTCTAGTTCAACAATAAAGGGGTTGTTTTCCAAATTACATAATCCCAAATCAACGCATAGCCATAAATACCATACCTGTAATAGTCAGATTGTAGGGTTTATACGTATGATGAACCTGAATCGGATAGATTTTAGCGTTCCCGGTTCAAATTGGGCTTGTTCTAGGAATTTTAGCACTAGATTTTGTGCCAATTTATGTAATATTAGGCCGAGGGTTGTTTCGTTGATTCCAGATGTAGCTTCGGGTGTTAGGAACCAATCTACATCGGTTGATCCTCATGTTAATGACACAAAGTTTGATAAGATATACATCCAAAATAGCTTGAATGCAAAGCCCTTGGTGATTGGAAGAAATGAGACTGATCAAGGTAAATTGGAAGAAGTAACTGAAGAAAGAAGTGATGGGTCATGTGTAAATATAGATAATTTGGAGGATCTGAATAAGAGTAAGGTTGAGACTGAGAGGGCGTTGTCTGAGAGTGAAAAGGAAGCTTGGAAGTTGCTCCGTAGTGCTGTTGTCACTTACTGTGGGAATCCGGTAGGGACTGTTGCAGCAAATGACCCTGCTGACAAACAACCACTGAATTATGATCAAGTCTTTTTCCGTGATTTCGTTCCATCAGCACTTGCCTTTCTGCTTAATGGTGAAGGGGAGATTGTCAAGAATTTCTTACTTCACACATTGCAATTGCAGAGTTGGGAGAAGACCGTTGACTGCTACAGCCCAGGGCAAGGGTTGATGGCAGCAAGCTTCAAAGTTAGAAGTGTACCTCTTGATGGAAGCAATGAAGCATTTGAGGAAGTCTTAGATCCCGATTTTGGTGAATCGGCTATTGGCCGGGTTGCACCTGTTGATTCAGGATTGTGGTGGATTATATTGTTGAGAGCATATGGGAAGCTAACGGGTGATTATGCATTGCAAGAAAGGGTGGATGTCCAGACGGGCATAAGACTTATTCTTAAGTTGTGTCTAACTGATGGGTTTGACATGTTTCCTTCTTTATTAGTTACTGATGGTTCCTGCATGATTGATAGAAGGATGGGCATTCATGGTCACCCTCTTGAGATCCAAGCCTTATTTTACTCAGCTTTACGCTGCTCTCGTGAGATTCTGACAGTCAATGATGCAACAAAGAGTCTGGTGGCTGCCGTTAGTAATCGCCTGAGTGCACTCTCATTCCATATGAGAGAGTATTATTGGGTTGATATAAAGAAGATTAATGAAATTTATCGTTATAAGACGGAAGAATATTCTATGGATGCTGTCAACAAGTTTAACATCTATCCAGAGCAAATTCCTTCATGGTTAGTGGACTGGATCCCCGAGGAAGGTGGATATTTCATGGGCAATTTGCAACCTGCTCATATGGACTTTAGGTTTTTCACACTTGGAAACCTTTGGGCCATTGTCTCTTCTTTAGGCACGACAAGACAGAACAGGGAAATTTTGAAGTTGATAGAGACCAAATGGGATGATCTTGTTTCTCAAATGCCTATGAAGATATGTTATCCAGCACTAGAGGGTGAGGAATGGCGTATAATCACTGGTTGTGACCCCAAGAACACCCCATGGTCATATCACAATGGTGGATCTTGGCCAACACTTCTCTGGCAGTTCACCTTAGCCTGCATCAAGATGGGAAAGCCTGAATTGGCACAGAAGGCAATTAACGTAGCAGAGAAAAGGCTTTCCGTGGATAGATGGCCAGAGTATTACGATACACGGAATGGAAAATTTATCGGGAAGCAATCTCGATTGATGCAGACATGGACTATAGCCGGTTTCCTAACTTCAAAGATGCTTTTAAAGAATCCAGAGAAGGCATCTTTGTTGTTTTGGGAGGAGGATTTTGAACTTCTACAGAACTGTGTCTGCATGCTAAACAAAACTGGTAGAAGGAAGTGTTCTCGTTTTGCTGCAAGAGCTCAGATTCTTGTTTAA 2052 0.4137 MTTGSYIGISTIKPCSRILSSYRSSSLFGFSPIKFNGSSSTIKGLFSKLHNPKSTHSHKYHTCNSQIVGFIRMMNLNRIDFSVPGSNWACSRNFSTRFCANLCNIRPRVVSLIPDVASGVRNQSTSVDPHVNDTKFDKIYIQNSLNAKPLVIGRNETDQGKLEEVTEERSDGSCVNIDNLEDLNKSKVETERALSESEKEAWKLLRSAVVTYCGNPVGTVAANDPADKQPLNYDQVFFRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMAASFKVRSVPLDGSNEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQTGIRLILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREILTVNDATKSLVAAVSNRLSALSFHMREYYWVDIKKINEIYRYKTEEYSMDAVNKFNIYPEQIPSWLVDWIPEEGGYFMGNLQPAHMDFRFFTLGNLWAIVSSLGTTRQNREILKLIETKWDDLVSQMPMKICYPALEGEEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGKPELAQKAINVAEKRLSVDRWPEYYDTRNGKFIGKQSRLMQTWTIAGFLTSKMLLKNPEKASLLFWEEDFELLQNCVCMLNKTGRRKCSRFAARAQILV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1141 683 Pfam Alkaline and neutral invertase 201 642 IPR024746 GO:0033926
Lal19g1141 683 SUPERFAMILY Six-hairpin glycosidases 200 634 IPR008928 GO:0005975
Lal19g1141 683 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 682 - -
Lal19g1141 683 Coils Coil 180 200 - -
Lal19g1141 683 Gene3D - 229 632 IPR012341 GO:0005975
Lal19g1141 683 PANTHER - 5 682 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1141 Lal-Chr19 14933055 14937791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1141 - - adu:107462633 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1141 19 14933055 14937791 Lal19g1141 19 14933055 14937791 ECH
Lal7g1001 7 16204788 16210195 Lal19g1141 19 14933055 14937791 LSH