Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1138 ATGAAGAGTAGTAGTACCTCAACCTCTATGTCCTCTTTTGCACTCTATATTCTTCTATTCTCTCATGTTCTCTTTACACTAACTCATTCCTCAGTCCTATTGAGGGATGAGGGAGATGATGGTGATTTGGTGGACCAGATATGCAAAAGGACACCTTTTTATGACCTATGCAGCAAGATCCTACATTCAAACCCTCTAGCCCCTAAAAGTGATCCAAAGGGTATAGCACTCATAATGGTGAATAACATTCTAGCAAATGCTACTGATACACTGAGTTACATTGAAGAGCTTATCAAGCATACCTCAGACCAACAATTGGAACAAGACTTGGCTTTCTGTGCTGAGTCATACATCCCAGTTGTGAAGTACATTCTTCCACAAGCAGCTGAAGCTATAAGCCAAGGTAGATTTGGTTTTGCCAGTTACAGCATAGCTGATGCTGAGAAGGAAGTAGATGCTTGCAACAAGAAATTCCCTGGCTCAACTCAATCACCCTTAGGTGATAGAAATAACATTATGCAGAAACTGGTTGATGTAGCTTCAGCAATTGTAAACCTGTTATTAAATGGCTGA 573 0.4049 MKSSSTSTSMSSFALYILLFSHVLFTLTHSSVLLRDEGDDGDLVDQICKRTPFYDLCSKILHSNPLAPKSDPKGIALIMVNNILANATDTLSYIEELIKHTSDQQLEQDLAFCAESYIPVVKYILPQAAEAISQGRFGFASYSIADAEKEVDACNKKFPGSTQSPLGDRNNIMQKLVDVASAIVNLLLNG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1138 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 188 IPR035513 -
Lal19g1138 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 187 IPR035513 -
Lal19g1138 190 Pfam Plant invertase/pectin methylesterase inhibitor 42 183 IPR006501 GO:0004857
Lal19g1138 190 SMART PMEI_2 39 183 IPR006501 GO:0004857
Lal19g1138 190 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 187 IPR006501 GO:0004857
Lal19g1138 190 CDD CIF_like 42 187 IPR034087 GO:0004857|GO:0043086
Lal19g1138 190 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 12 190 - -
Lal19g1138 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1138 Lal-Chr19 14925076 14925648 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1138 - - gmx:100820305 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1138 19 14925076 14925648 Lal19g1138 19 14925076 14925648 ECH
Lal14g1590 14 16432307 16432870 Lal19g1138 19 14925076 14925648 LSH