Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1129 ATGATTGTTGGAGAGGAGGAAACAAAAGTGGTTTACTATGTACACCTCTTTGATTTCTCCGCCATTTTCCCTCCTAACTTTCAACGGATTCCACGAGGTCCCTCTCTTATAATCTCATCTTCTCTCTCTCTTCACATCACAGTCTCTTCTCTCCCTTTCTCTTCATATCTCTCTATCTTCATTTCACCATTTCCTTCAACAAAAATGCATTCTACTCTCTCACTCTCTTCTCCGATCACCTCCTCCGCTGCCACCACTTCCAGATCTCACTCTCTTCCCTTCACCGCCGCTAAACCTATTAATCTCCGCTTCTGCGGCTTGAGGCCTGAGGCATTACTTTCCACTACTCCTTCCCTTAACCGCCGTCACACTCACCTTCCTTGCCGATCACATTCCACCATATCGGCTGCGCTTTCCGGCAATGACGCACCTCCGAAATCATTCGATTATGATTTGTTGATTATTGGCGCTGGTGTCGGCGGACATGGTGCTGCACTTCATGCTGTTGAGAAGGGTTTGAAAACAGCTATTGTGGAAGGAGATGTGGTGGGAGGGACATGTGTAAACAGAGGTTGTGTTCCTTCTAAAGCTCTTTTGGCAGTTAGTGGTCGTATGCGGGAACTAAAGAGTGATCATCATTTGAAGTCCTTAGGATTACAGGTTTCTGCTGCTGGCTATGACAGACAAGGAGTGGCTGACCATGCTAATAATCTTGCTACGAAAATCCGTAGCAACTTAACCAACTCGATGAAAGCACTTGGAGTAGACATACTTACCGGTTTTGGAAGTATTGTGGGTCCTCAAAAGGTGAAAATTGGATCTTCAGACAAAGTAGTAACTGCAAAAGATATCATCATTGCCACTGGTTCTGTTCCTTTTGTTCCTAAGGGCATTGAAGTGGATGGGAAGACCGTGATTACCAGTGATCATGCACTTAAACTAGAGTCTGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTATATTGGTCTTGAATTCAGTGATGTATATACGGCGCTTGGAAGTGAGGTTACTTTTGTCGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAATTGGCTCAAAGAGTTCTTATAAATCCCCGGAATATTGACTATCACACTGGAGTTTTTGCAACTAAGATCACACCTGCGAGAGATGGAAAACCTGTCTTGATTGAGCTCATTGATGCAAAGACAAAGGAACCGAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCAACTGGAAGGGCACCTTTCACACGGGGTCTTGGATTGGAGAACATTGATGTGGTAACACAACGTGGCTTTATTCCTGTGGATGAGCGCATGCAAGTAATTGATGCAAATGGCAAGCTGGTACCTAATTTGTATTGTATTGGGGATGCTAATGGCAAGATGATGCTTGCTCATGCTGCTAGTGCACAAGGAATTTCCGTGGTTGAACAAGTCACTGGAAGAGATCATGTTCTCAATCATTTAAGTATCCCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAAAAAGGTGAAAAAGAGGGTTTTGAAGTGAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCCTAGCCGAAAATGAAGGGGAGGGAATTGCCAAGTTGATATACAGACCTGACAATGGAGAGATACTAGGAGTTCATATTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAATGCAATAGCATTAGGGACTCGTATCCAGGACATTAAATTTGCAGTTCACGCACATCCAACTCTGTCTGAGGTTCTCGACGAGCTATTTAAATCTGCGAAGGTTAAAGAAAGAGCTTCTAGCCCAGTAAGTGAACCAGTTGCTGTCTAA 1902 0.4395 MIVGEEETKVVYYVHLFDFSAIFPPNFQRIPRGPSLIISSSLSLHITVSSLPFSSYLSIFISPFPSTKMHSTLSLSSPITSSAATTSRSHSLPFTAAKPINLRFCGLRPEALLSTTPSLNRRHTHLPCRSHSTISAALSGNDAPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELKSDHHLKSLGLQVSAAGYDRQGVADHANNLATKIRSNLTNSMKALGVDILTGFGSIVGPQKVKIGSSDKVVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFATKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTRGLGLENIDVVTQRGFIPVDERMQVIDANGKLVPNLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGIAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVKERASSPVSEPVAV 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 151 173 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 183 198 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 284 293 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 320 345 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 414 428 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 462 469 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 497 518 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 566 581 - -
Lal19g1129 633 PRINTS Pyridine nucleotide disulphide reductase class-I signature 588 608 - -
Lal19g1129 633 Pfam Pyridine nucleotide-disulphide oxidoreductase 150 482 IPR023753 GO:0016491
Lal19g1129 633 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 150 618 IPR006258 GO:0004148|GO:0050660
Lal19g1129 633 Gene3D - 151 483 IPR036188 -
Lal19g1129 633 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 85 624 - -
Lal19g1129 633 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 501 612 IPR004099 GO:0045454
Lal19g1129 633 Gene3D - 500 624 IPR016156 GO:0016491|GO:0050660
Lal19g1129 633 SUPERFAMILY FAD/NAD(P)-binding domain 141 491 IPR036188 -
Lal19g1129 633 PRINTS FAD-dependent pyridine nucleotide reductase signature 152 171 - -
Lal19g1129 633 PRINTS FAD-dependent pyridine nucleotide reductase signature 281 299 - -
Lal19g1129 633 PRINTS FAD-dependent pyridine nucleotide reductase signature 320 338 - -
Lal19g1129 633 PRINTS FAD-dependent pyridine nucleotide reductase signature 413 429 - -
Lal19g1129 633 PRINTS FAD-dependent pyridine nucleotide reductase signature 447 469 - -
Lal19g1129 633 PANTHER DISULFIDE OXIDOREDUCTASE 85 624 - -
Lal19g1129 633 Gene3D - 293 420 IPR036188 -
Lal19g1129 633 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 500 614 IPR016156 GO:0016491|GO:0050660
Lal19g1129 633 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 184 194 IPR012999 GO:0016668
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1129 Lal-Chr19 14852956 14860178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1129 69 625 Acyl Lipid Metabolism Gene Families AT3G16950 83.186 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1129 K00382 - gmx:100809578 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1129 19 14852956 14860178 Lal19g1129 19 14852956 14860178 ECH
Lal14g1576 14 16329803 16335289 Lal19g1129 19 14852956 14860178 LSH