Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1109 ATGGAAGGGATAGAGCGCAGAACAGTAAATGTGAATGGCATAAACATACACATAGCTGAGAAAGGTGAAGGTCCATTAATCCGAAAGGAGTCTCACTCCTTCATTCATGGCTTCCCTAACCTATGGTATTCATGGCGCAACCAAATCATAGCTCTTGCTTCTCTTGGTTACCATTGTGTAGCACCAGACCTGCGTGGTTTTGGTGACACAGACGTGCCAACTACAGCCACATCCTACACCACCCTCCATATAGTTGGTGATCTCATTGGGTTGTTGGATACTATAGCAGCTGATCAAGAAAAAGTGTTAGTGGTGGGTCATGATTGGGGAGCTATGATTGCTTGGTCTCTTTGTCTATATCGTCCTAATAGAGTTAAGGCTCTTGAGGTAGGAGATATAGAATCTGAGTTTTCCCAGATTGGCACTGAAAGAGTCCTGAAGGAATTCCTCACATACAGTAACCCAGGTCCACTTTATTTAGCTAAGGGAAAAGGGTTTGGAAATCCGATTGATTCTCCCATTACTTTGCCATCATGGTTACCTGAAGAAGAATTCAACTACTATGTCACCAAATATAACAAGACTGGATTTACTGGAGCAATGAACTACTATAGGAATTTGGATCTAAATTGGGAACTCACTGCTCCATGGACTTCAACCAACACATCTATGCATTCTTTTCAAAATTTTAAGTTGGCATTAGGCATCTTCCTGTTATATATGTTGGCATTGTTTTTATCCTTTGCTGCATCATTTTTCAGTTCTTGTGGATTGTGGATTCTCAAATTGGGTCTATTAACGGAAGAATTATCTAAAACCCTTTTCTACCGTAGAGAATCTGATCTTCCTGATAAGCAGGGGCTTCTTCAGCTTCAATGTCAGGTAGATCACCCAAACGTTGAAGGGTTTTCTGAACAAGCTCATCAATTTCGTGTTGCTTACCATCCTCACAGTCCTTATCAATTAGCTTCCATAGTTTCCTTTCTACCGTGTCATACACCTTTTGCACAATAA 1014 0.4093 MEGIERRTVNVNGINIHIAEKGEGPLIRKESHSFIHGFPNLWYSWRNQIIALASLGYHCVAPDLRGFGDTDVPTTATSYTTLHIVGDLIGLLDTIAADQEKVLVVGHDWGAMIAWSLCLYRPNRVKALEVGDIESEFSQIGTERVLKEFLTYSNPGPLYLAKGKGFGNPIDSPITLPSWLPEEEFNYYVTKYNKTGFTGAMNYYRNLDLNWELTAPWTSTNTSMHSFQNFKLALGIFLLYMLALFLSFAASFFSSCGLWILKLGLLTEELSKTLFYRRESDLPDKQGLLQLQCQVDHPNVEGFSEQAHQFRVAYHPHSPYQLASIVSFLPCHTPFAQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1109 337 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2-LIKE 1 128 - -
Lal19g1109 337 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2-LIKE 129 222 - -
Lal19g1109 337 PANTHER EPOXIDE HYDROLASE 1 128 - -
Lal19g1109 337 PANTHER EPOXIDE HYDROLASE 129 222 - -
Lal19g1109 337 Pfam alpha/beta hydrolase fold 34 128 IPR000073 -
Lal19g1109 337 SUPERFAMILY alpha/beta-Hydrolases 2 214 IPR029058 -
Lal19g1109 337 PRINTS Epoxide hydrolase signature 36 54 IPR000639 GO:0003824
Lal19g1109 337 PRINTS Epoxide hydrolase signature 56 71 IPR000639 GO:0003824
Lal19g1109 337 PRINTS Epoxide hydrolase signature 104 117 IPR000639 GO:0003824
Lal19g1109 337 PRINTS Epoxide hydrolase signature 118 131 IPR000639 GO:0003824
Lal19g1109 337 Gene3D alpha/beta hydrolase 1 129 IPR029058 -
Lal19g1109 337 Gene3D alpha/beta hydrolase 130 227 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1109 Lal-Chr19 14707992 14710830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1109 1 224 Acyl Lipid Metabolism Gene Families AT4G15960 47.909 7.23e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1109 - - cam:101490647 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1109 19 14707992 14710830 Lal19g1109 19 14707992 14710830 ECH
Lal7g1386 7 18893833 18895721 Lal19g1109 19 14707992 14710830 LSH