Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1072 ATGTCAGAGATAGAAATTGTGGATTTATGTAGTGATGATGAAGGGGGGCAGGTTGGTCATTCAGGGTCAGATTTTGTTAGTTGTGCAAAGCAACAAAATGAGACTAGCAAAGGCCAACAATGCCATTCTACTTGTCAAGATTATGACAAAAATATAAGCTTTAATGGTCCAAGTACATGTCATCGTTATTCTGGTTTAGTGGAGCCTGGTTTGTTGCCAGATGATGATATAGGCCTTTCTTATTCATCACCAATTTGTGAAACACCTCTTTGTAGGATGTTTTGGAAGGCTGGAACTTACGATAACGGGCCTGGTTCTAAAATTCAAATCCAAAATGCAGATAACTACTTACATGTCCACCCTTTGTTTCTTCACTCAAATTCAACTTCACATAAGTGGGCATTTGGTGCCATAGCTGAACTTCTTGATAATGCAGTTGATGAGATCCAAAATGGGGCTACTTTTGTAATTTTAGATAAAATTTCAAATCCAAAGGATGGAAGTCCAGCATTGTTGATTCAAGACGATGGTGGTGGAATGGATCCAGAAGCAATGCGTAGATGCATGAGTTTCGGATTTTCAGAGAAGATGTCAAAAGTTGCAGTTGGACGGTATGGCAATGGCTTTAAGACTGGTACTATGAGACTGGGTGCAGATGCAATTGTCTTCAGCCACCACCTTAATAACCGGATAATGACTCAAAGCATTGGGCTTCTGTCATATACATTCTTGATGCGAACAAAGCTTCACAGAATAGTTGTACCGATGGTGAGTTATGAGTTTAATACCTCAAGTGGATCCTTCAAAATACTAAACGGTGAAGAGCACTTTTTGTCTAACTTGTCCATATTGTTGCACTGGTCACCATATTCATCAGAAAAAGAACTTTTGGATCAATTTCTTGACATTGGTTCTCACGGAACTAAAATTATTCTCTTCAATTTATGGGACAATGACGACGGGAATTTGGAACTAGACTTTGATACAGATCAGGAGGATATCCACATTGCTGGTAATATCAAGAAGGTCGGTAAAGTTCCTACCTGGAAGACAGTAAATGAGCAACACTTTGCTAACCGGTTTCGTTATTCTTTACGTGCAACAGTTGTGACAACAATTGGATTTCTTAAGGAAGCTCCCGAAGTTAGCATCCAAGGCTTCAATATATATCACAAAAACCGGCTGATACTGCCATTTTGGCAGGTTGCGAACAATAAGGTTAGAGGAGTTGTTGGTATCCTGCACGCAGATTTTGTTGAGCCAACTCACAATAAGCAAGATTTTGAGAGAACTTCCCTCTTTCAAAAGCTTGAAGTGCGCTTGAGGCAAATGACAATGGAGTACTGGTGTTATCATTGCCATCTAATTGGGTATCGGGAAATGAAGCCTCGAGCTCAATCTAGCCCACTGGAAGCGTCACTGCAGAAATCACTTGGTATAGAAAAACCAGTTGCTTTCAACAAAAGTTTCTCACCTGTACTATTACCCCACACACAAAGCAGTTCTGATCAAGCGTCTCTTACTAAGAGGAATGCACATGGATTAACAGATCTTCTAAAGTTGAAAAGGCAAAGAACAGAAGAGAATGTAACAGGTGTTGGTTGCAATCAGAATTCACAGACTGTCGCATATCCTGCAGACCAGGTGGTAGACCAACAGGCTATAAAATTAATGCAAGTGAACAAGAAGCTTCATGCAGATTGTTTGAAATATGAAAGTGCAGAGGAAGAACTTAACCACAAGGTGATGCATCTTAGAATTAAAATTGAAGAAGCTAAGCATGAGCGTAATCGGCTTTTCACTGAAATACAGTCCCTGGACATCATGTGA 1830 0.4 MSEIEIVDLCSDDEGGQVGHSGSDFVSCAKQQNETSKGQQCHSTCQDYDKNISFNGPSTCHRYSGLVEPGLLPDDDIGLSYSSPICETPLCRMFWKAGTYDNGPGSKIQIQNADNYLHVHPLFLHSNSTSHKWAFGAIAELLDNAVDEIQNGATFVILDKISNPKDGSPALLIQDDGGGMDPEAMRRCMSFGFSEKMSKVAVGRYGNGFKTGTMRLGADAIVFSHHLNNRIMTQSIGLLSYTFLMRTKLHRIVVPMVSYEFNTSSGSFKILNGEEHFLSNLSILLHWSPYSSEKELLDQFLDIGSHGTKIILFNLWDNDDGNLELDFDTDQEDIHIAGNIKKVGKVPTWKTVNEQHFANRFRYSLRATVVTTIGFLKEAPEVSIQGFNIYHKNRLILPFWQVANNKVRGVVGILHADFVEPTHNKQDFERTSLFQKLEVRLRQMTMEYWCYHCHLIGYREMKPRAQSSPLEASLQKSLGIEKPVAFNKSFSPVLLPHTQSSSDQASLTKRNAHGLTDLLKLKRQRTEENVTGVGCNQNSQTVAYPADQVVDQQAIKLMQVNKKLHADCLKYESAEEELNHKVMHLRIKIEEAKHERNRLFTEIQSLDIM 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1072 609 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 133 334 IPR036890 -
Lal19g1072 609 Pfam Morc6 ribosomal protein S5 domain 2-like 351 449 IPR041006 -
Lal19g1072 609 Gene3D - 107 315 IPR036890 -
Lal19g1072 609 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 368 607 - -
Lal19g1072 609 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 1 367 - -
Lal19g1072 609 Coils Coil 575 609 - -
Lal19g1072 609 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 136 232 - -
Lal19g1072 609 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 367 IPR045261 GO:0016887
Lal19g1072 609 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 368 607 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1072 Lal-Chr19 14464252 14472675 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1072 - - gmx:100795667 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1072 19 14464252 14472675 Lal19g1072 19 14464252 14472675 ECH