Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1068 ATGGCTCTACTGCGTGTATACCCAACCATAACTCTTCCTCTTTCACTTCCATATCATGTTATTCCTTCAAAGCCAAAAACTTTCTCATTCTCTAAATTTACAGTTCGAAATTCTAACCTTCAAATGCAACTACAACCCCATGAATCACACAAGTTAGTTGTTGCAGTGAAGGAGAAGCTTGAGAAAGAGCACCATAGCCTCCCTGTGGGAAAAAATGGAAGGGATGATGAAGATATGATTCTATGGTTTCTCAAAGACCGCAAGTTTTCTGTTGAAGATGCTGTTTCCAAGTTGACTAAAGCCATTATTTCTGTTATACCAAAGAAGTGTATATTTATTTTCAATTCATTTTTCCACCTTTCCATTTCTGCTTATTCAACCAAGCAGGCTCTCTATGCTTTTCATGCTTTCACCTTTATTCTACTCTATAAGAAATGGCGTCAAGATTTTGGGGTGTCTGAATTGACTGAAGACGCCGTTAAAGACGTTGCTCAAACTGGAAAAGCATTTGTACATGACTTTCTAGATATCAATGGGAGACCTGTGCTTGTGGTGGTTGCATCAAAGCATTTTCCTGAAGCACAGGACCCTATAAAGGATGAAAGGTTGTGCACTTTCTTGATCGAGAAGGCATTAAGTAAGCTTCCACCTGGGAAAGAACAGATTCTTGGAATAATTGATCTCAGAGGTTTTGGTACACAAAATGCTGATCTTAGATACTTGACATTCTTGTTGAATGTATTCTATTATTACTATCCCAAGCGATTGGCTCAAATACTATTTGTAGATGCTCCCTTTGTGTTTAAGCCGATGTGGCAGCTAGTCAAGCCCTTATTAAAATCATATACTTCTCTGGTAAGATTTTGCTCTGTGGACACGGTCAGGAAGGAATATTTTACAAAGGAAACTTTGCCATCCAACTTCAGAGATTGA 933 0.3848 MALLRVYPTITLPLSLPYHVIPSKPKTFSFSKFTVRNSNLQMQLQPHESHKLVVAVKEKLEKEHHSLPVGKNGRDDEDMILWFLKDRKFSVEDAVSKLTKAIISVIPKKCIFIFNSFFHLSISAYSTKQALYAFHAFTFILLYKKWRQDFGVSELTEDAVKDVAQTGKAFVHDFLDINGRPVLVVVASKHFPEAQDPIKDERLCTFLIEKALSKLPPGKEQILGIIDLRGFGTQNADLRYLTFLLNVFYYYYPKRLAQILFVDAPFVFKPMWQLVKPLLKSYTSLVRFCSVDTVRKEYFTKETLPSNFRD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1068 310 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 159 310 IPR001251 -
Lal19g1068 310 CDD SEC14 161 308 IPR001251 -
Lal19g1068 310 SUPERFAMILY CRAL/TRIO domain 158 298 IPR036865 -
Lal19g1068 310 SUPERFAMILY CRAL/TRIO N-terminal domain 48 101 IPR036273 -
Lal19g1068 310 SMART sec14_4 163 308 IPR001251 -
Lal19g1068 310 Gene3D - 41 309 IPR036865 -
Lal19g1068 310 Pfam CRAL/TRIO domain 165 308 IPR001251 -
Lal19g1068 310 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 144 310 - -
Lal19g1068 310 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 22 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1068 Lal-Chr19 14434087 14441083 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1068 - - adu:107478851 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1068 19 14434087 14441083 Lal19g1068 19 14434087 14441083 ECH