Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1065 ATGGCTTCCCCTGCTCCTTTCGACGATGACTTTGATTTTGGAGGTGGATTTGGCGGAACACATTCAGGTAATAAGAGGCCATCTCCCGATTTTGAAGATGAAGATTACGATAATGATCCTTTCGGAAACAAGAAGGCTAAGTCAAAAGCTGAAGAAGCTGCTTCTGGTGTAACCACTGGAATGATCTTGTCTCTTCGCGAGAGTCTTCAGAACTGTAAGGATTCGGTTGCAACATGCCAAAATGAACTTGAGGCTGCAAAGTCTGAGATTGAGATATGGCGCTCTGCATTTCAAAATGAGCCGTACATACCTGATGGGTCCACTCCAGCACCCAAATTGGTGAATAGTTATCTTCAATCTCTGAAGTCATGTGAAGAGTCTTTAAGAGAGCAGCTTGAAAAGGCAAAGAAAAAGGAAGCTGCATTCATTGTGACATTTGCGAAAAGGGAACAAGAGATAGCAGAGTTGAAGTCTGCTGTGCGGGATCTAAAAGCTCAACTCAAGCCAGCATCAATGCAGGCAAGGAGGTTGTTACTTGATCCAGCTGTTCATGAAGAGTTCACACGGTTAAAGAACTTAGTTGAGGAGAAGGACAAAAAAGTAAAGGAGTTGCAAGATAACATTGCTGCTGTAAATTTTACTCCTCAAAGCAAGATGGGGAAGATGCTGATGGCTAAATGTAAAATCCTTCAGGAGGAAAATGAGGAGATAGGGAATCAAGCTTCTGAGGGCAAGATGCAAGAATTAGCATCAAAACTTTCATTGCAGAAACACCAGAATGCAGAACTCAAAAGTCAATTTGAAGGGCTGCAGAAGCATATGGATGGACTGACAAATGACGTGGAAAGATCCTCTGAAACGGTTCTTATGTTGCAAGGGAAAATGGAAGAGAAGGATCAAGAGATTCAAAAACTGAAAGATGAGTTGCAGCAAAAAAGATGCATGAAAAATGCGAAAACAGACATTGCATCTAATAAAAAAGACAGTGATGAAATGGTACCAAGGGAAGACGCTGAGTAA 1020 0.4176 MASPAPFDDDFDFGGGFGGTHSGNKRPSPDFEDEDYDNDPFGNKKAKSKAEEAASGVTTGMILSLRESLQNCKDSVATCQNELEAAKSEIEIWRSAFQNEPYIPDGSTPAPKLVNSYLQSLKSCEESLREQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPASMQARRLLLDPAVHEEFTRLKNLVEEKDKKVKELQDNIAAVNFTPQSKMGKMLMAKCKILQEENEEIGNQASEGKMQELASKLSLQKHQNAELKSQFEGLQKHMDGLTNDVERSSETVLMLQGKMEEKDQEIQKLKDELQQKRCMKNAKTDIASNKKDSDEMVPREDAE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1065 339 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 336 - -
Lal19g1065 339 Coils Coil 288 315 - -
Lal19g1065 339 MobiDBLite consensus disorder prediction 1 57 - -
Lal19g1065 339 Coils Coil 146 166 - -
Lal19g1065 339 MobiDBLite consensus disorder prediction 316 339 - -
Lal19g1065 339 Coils Coil 246 280 - -
Lal19g1065 339 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 336 IPR033757 GO:0000381|GO:0005634|GO:0080009
Lal19g1065 339 Pfam WTAP/Mum2p family 134 288 IPR033757 GO:0000381|GO:0005634|GO:0080009
Lal19g1065 339 Coils Coil 69 96 - -
Lal19g1065 339 Coils Coil 187 207 - -
Lal19g1065 339 Coils Coil 118 141 - -
Lal19g1065 339 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1065 Lal-Chr19 14392177 14402987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1065 K22824 - gmx:100776997 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1065 19 14392177 14402987 Lal19g1065 19 14392177 14402987 ECH