Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1064 ATGGTTCTCCCTCACCTTAATTCCCCACCCTCTATCAAACTTGAAGCTTCAACTTTCTTAGCAAATGACCATCATATCCTCACTCAAATCCCACCCAACATAACCACCACACCTCCACCCCATGATCCTTCAAACACCGTCGGTTGTTTCGTCGGTTTTAACGCCACCGAGCCAAGTAGCCGCCACGTGGTTCCCATAGGCAAGTTTAGTGGAATAAGGTTCATGAGTATATTCAGATTCAAACTATGGTGGAGCACTCATTGGATAGGAAACAATGGCCACGATGTTGAGTATGAAACACAGTTTATGATGTTGGAGAACAACTCTGACATAGGACGCCCCTATGTTCTTCTTTTGCCACTCCTTGAACGAGGTTTCAGAGCTTGTCTCCAACCTGGGTTTGATGACTACGTGGATATTTGCATGGAGAGTGGGTCCACACGTGTCATTGAATCTAACTTTAGAAGTTGTTTGTACATTCATGTGGATGATGATCCTTATAGTTTAGTGAAGGAAGCAATGAAAGTGATGAAAGAACATCTTAGAACATTCAAGCTTCTAGAAGAGAAAACACCACCAGGTATTGTGGACAAGTTTGGGTGGTGCACCTGGGATGCATTTTACCTAAAGGTGAATCCACAAGGAGTGTGGGAAGGGGTGAAGGGCCTAGTAGAGGGTGGGTGCCCTCCAGGTTTAGTCATCATTGATGATGGTTGGCAAACTTTTTGTCATGATGATGAACCAGTGACAGATGGGGGAAGCTTGAATTGCTCTATACCTGGTGAACAAATGCTGAATAGGCTCATAAAATTCGAAGAGAATAGTAAGTTCAGGGAGTACAAATCTCAAAGGGTACCTAATAACAAAGGGATGGGTGCCTTTGTTAGGGACCTGAAGGAGGAGTTTAAAGCCTTAGAGTATGTGTATGTGTGGCATGCTTATTTGGGGTATTGGGGTGGGATAAGGCCTAATGTTGCAGGGATGCCTGAGTCCAAGATCATTGATCTGAAGATGTCTGAAGGGGTGGAAAAGATGATGGTTGATTTAGCAGTGGTGAAAGTAATAGAGAATAGGGTGGGATTGGTGGCACCTGATGAGTTATATGAGGGACTTCACTCACACCTTGAATCAGTGGGAATTGATGGTGTCAAGATTGATGTCACAAATATTCTTGAGATGATATCGGAGGAATATGGTGGTCGTGTTGAACTCGCAAAAGCATATTTCAAAGCACTCACTGCTTCAGTTAGAAAACATTTCAAAGGCAACGGGGTCATTGCTAGCATGCAGCAAAGCAACGAGTTCATGTTCCTTGGTGCAGAAACCATATCACTAGGACGAGTTGGTGATGATTTTTGGTCTAAGGATCCTGCTGGAGATCCAACAGGGACATATTGGCTGCAAGGATGTCACATGGTGCATTGTGCATACAACAGCTTATGGATGGGAAATTTTATACACCCTGATTGGGACATGTTCCAAACTAATCATGTTTGTGCCGAATTCCATGCTGCTTCTAGAGCCATCTCTGGTGGACCAATTTATATCAGTGACTCTATTGGAAATCACAACTTCAAGTTGCTTAAGATGCTGGTTCTACCTGATGGTTCCATTTTGAGGTGTCAACATTTTGCACTTCCTACCAGAGATTGCTTATTTGAAGACCCTTTGCATGATGGGAAAACAATGCTCAAAATTTGGAATCTCAACAAATATACAGGGGTTTTGGGTCTGTTCAACTGCCAAGGAGGAGGGTGGTGCCCGGAATCTCGGCGAAACAAGAGTTCCCCTGATTGTTCAAACACCGTGACTTGCTTTGCAAGTCCTAAGGACATAGAATGGAGCAAAGGGAAGGAACCAATATACATCAAAGAAGTAGCTTTATTTGCTGTTTACACATTTAAGGATGACAAGTTGAAATTTCTCAAGTGGGAAGAGAGTTTAGAGTTTTCACTTGCACCTTTTAGTTTTGAGCTTATGACAGTTTCTCCAGTGCAGGCCTTACCCAAAAAATCAGTCAAATTTGCTCCAATTGGATTAGTAAACATGCTCAACTCTGGAGGGTCAATTCAGTCTTTAGAATTTGATGAGCATGAAAATGTGGCTAGAGTTGGGTTAAGAGGACATGGAGAAATGAGAGTATTTGCATCTGAAAAGCCAGTGAGTTGCAAGATTGATGAAACACATGTGGAATTTGATTACGAAGACAACATGGTTAGGGTCCATGTTCCTTGGCCTAGCTCTTCAAGATTATCCATGGTGGAGTATTTGTTCTGA 2277 0.4282 MVLPHLNSPPSIKLEASTFLANDHHILTQIPPNITTTPPPHDPSNTVGCFVGFNATEPSSRHVVPIGKFSGIRFMSIFRFKLWWSTHWIGNNGHDVEYETQFMMLENNSDIGRPYVLLLPLLERGFRACLQPGFDDYVDICMESGSTRVIESNFRSCLYIHVDDDPYSLVKEAMKVMKEHLRTFKLLEEKTPPGIVDKFGWCTWDAFYLKVNPQGVWEGVKGLVEGGCPPGLVIIDDGWQTFCHDDEPVTDGGSLNCSIPGEQMLNRLIKFEENSKFREYKSQRVPNNKGMGAFVRDLKEEFKALEYVYVWHAYLGYWGGIRPNVAGMPESKIIDLKMSEGVEKMMVDLAVVKVIENRVGLVAPDELYEGLHSHLESVGIDGVKIDVTNILEMISEEYGGRVELAKAYFKALTASVRKHFKGNGVIASMQQSNEFMFLGAETISLGRVGDDFWSKDPAGDPTGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQTNHVCAEFHAASRAISGGPIYISDSIGNHNFKLLKMLVLPDGSILRCQHFALPTRDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPESRRNKSSPDCSNTVTCFASPKDIEWSKGKEPIYIKEVALFAVYTFKDDKLKFLKWEESLEFSLAPFSFELMTVSPVQALPKKSVKFAPIGLVNMLNSGGSIQSLEFDEHENVARVGLRGHGEMRVFASEKPVSCKIDETHVEFDYEDNMVRVHVPWPSSSRLSMVEYLF 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1064 758 Pfam Raffinose synthase or seed imbibition protein Sip1 15 741 IPR008811 -
Lal19g1064 758 PANTHER - 3 758 IPR008811 -
Lal19g1064 758 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 3 758 - -
Lal19g1064 758 SUPERFAMILY (Trans)glycosidases 193 532 IPR017853 -
Lal19g1064 758 Coils Coil 170 190 - -
Lal19g1064 758 Gene3D Aldolase class I 196 534 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1064 Lal-Chr19 14386762 14391275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1064 13 758 Glycoside Hydrolase AT5G40390 61.257 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1064 K06617 - gmx:100798883 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1064 19 14386762 14391275 Lal19g1064 19 14386762 14391275 ECH