Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1046 ATGCAGCAATACTGGTCTGGGAGTGCCATAAATAAAAACAAAGGGATGGTGGAGAATTTGCAGCGTTATGGAGTGATCAAATCAACCAAGGTAGCTGAAGTAATGGAGACCTTTGATAGAGGTTTGTTTGTACCGAATGGAACTCCACCTTATGTTGACAGTCCCATGCCGATAGGCTACAATGTCACTATATCTGCACCGCACATGCATGCCACCTGCCTTCAGTTGCTGGAGGAAAAATTGCAACCTGGGATGTGTGCTCTCGATGTCGGCTCTGGAACTGGTTATCTGACAGCATGCTTTGCTTTGATGGTTGGACCCCAAGGTCATGCTATTGGTGTGGACCATATTCCTGAATTGGTTTCTTCTTCAATCGAGAATATTCAGAAAAGTGCTGCAGCTCCACTATTGAAAGATGGTTCCTTTTCTGTGCATGTTGGTGATGGAAGGGAAGGTTGGCCGGAGCATGCTCCTTACGATGCCATTCACGTTGGAGCAGCGGCATCCGAAATTCCAGAGCCACTTATTGACCAATTGAAGCCAGGAGGTAGAATGGTGATTCCTGTTGGAAACATACTTCAAGATTTAAAGGTTGTGGATAAAAACTCTGATGGTTCTATCAGTGTTTGCACTGAGGGTTCTGTTCGTTATGTACCTCTCACTAGTAAAGAAGCACAACTGCGAGGTTAG 690 0.4536 MQQYWSGSAINKNKGMVENLQRYGVIKSTKVAEVMETFDRGLFVPNGTPPYVDSPMPIGYNVTISAPHMHATCLQLLEEKLQPGMCALDVGSGTGYLTACFALMVGPQGHAIGVDHIPELVSSSIENIQKSAAAPLLKDGSFSVHVGDGREGWPEHAPYDAIHVGAAASEIPEPLIDQLKPGGRMVIPVGNILQDLKVVDKNSDGSISVCTEGSVRYVPLTSKEAQLRG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1046 229 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Lal19g1046 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 197 IPR029063 -
Lal19g1046 229 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
Lal19g1046 229 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Lal19g1046 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 229 - -
Lal19g1046 229 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
Lal19g1046 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 229 IPR000682 GO:0004719|GO:0036211
Lal19g1046 229 CDD AdoMet_MTases 88 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1046 Lal-Chr19 14252310 14254378 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1046 K00573 - twl:120004152 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1046 19 14252310 14254378 Lal19g1046 19 14252310 14254378 ECH
Lal19g1046 19 14252310 14254378 Lal4g0759 4 6420042 6423527 PCT
Lal4g0759 4 6420042 6423527 Lal19g1046 19 14252310 14254378 PCT