Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1034 ATGTTGCATTCTCTTCCTATTGTAGATATGAAGGGTATAAAAGACAAGTTATCTTCTCAATTGCGTCCTTTGCAACGCTCTTTTCAGTTCTGGGTTCGTGCTGTTGATATCTACACTGGTTATAAGGTGTTTCAAGTGAGAGTGAATTTCGAGAGAAATGTGCATAAGAGGGAAGCAATGTGGGAAACACAGCACGAACTTGCTGCTGATAAAATTTACTCTATGTGTTCTGACCTTGGAGGTTTCTTCCTCAAGATTGCTCAAATATTAGGGAAGCCTGACTTGGCCCCAGCTGCATGGGTGAGAAGGCTTGTTACACTATGTGATCAGGCTCCTGCTACCCCATTTGAAACTGTGAAATTAGTGCTGGAGAATGAGTTAGGTCAGGATATTGGCGATGTGTTTGAGAGGTTCGATATGGAACCCCTCGGTTCTGCTTCAATTGCTCAGGTCCATAAAGCAAGACTGAAAGGTGATAATGGTGATGTTGTTGTCAAGGTTCAGCATCCTGGAGTTCAGGATCTGATGATGACAGATATCCATAACCTACAAGCTTTTGCTTTGTACATACAAAAGACAGATGTCAAATTTGATCTATATTCGGTGACAAAGGAGATGGAAAAACAGATTGGATATGAATTTGACTTCATGAGGGAGGCTGGTGCAATGGAACGGATAAGAAAGTTCTTATATGAAAATAATAAAAGGGCTCCTGTTTTGGTCCCACGAGTAATACGGAATATGGTTACTAGGAGGGTCCTAGTTATGGAATACATGGATGGGATTCCAATAATGAACCTTGGTAATGAAATAGCAAAGAGAGGGATAGATCCACATAGTAAGGTTGCAGCAGCAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAGAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGATCAGAGGCAAGTCATTGGCTATATTTTTTTCCTGATATCTCTTTAAATTGTATTTCATCTCTCTTCGATGAGTATTCTACCATAGCCTTGCTTGATTATGGGCAGGTGAAGGATCTACCTGAACAGTTAAGAATTGGTTATGCTAACCTAGTTCTTGCAATTGCTGACTGTGACCCAGTAAGAGCTTCAAAGAGCTATAGGGAGCTTGGTATAGATACCTTGAGTAAATGTGAAAATGAGCAGCAAGAAATGCTTAAACTGGCACAGACAATGTTTGATACAAAATTGCCTCCTGGGGTGGTAATGCTGCAACCTTTCTCAGAGGAATCTTCAATAAAAAAAATTGCTGTTGAGGCTTTCCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGTGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGACCCATTGCAGAAGAAGCTTTGATTCAAGCTGGAAAACTTAAAGGTAAGGTTGTTAGACGTGGAGGGAGCAAACGCGGTTTAGTAAGAAGATTATTTAGGAGAGACTAA 1530 0.4059 MLHSLPIVDMKGIKDKLSSQLRPLQRSFQFWVRAVDIYTGYKVFQVRVNFERNVHKREAMWETQHELAADKIYSMCSDLGGFFLKIAQILGKPDLAPAAWVRRLVTLCDQAPATPFETVKLVLENELGQDIGDVFERFDMEPLGSASIAQVHKARLKGDNGDVVVKVQHPGVQDLMMTDIHNLQAFALYIQKTDVKFDLYSVTKEMEKQIGYEFDFMREAGAMERIRKFLYENNKRAPVLVPRVIRNMVTRRVLVMEYMDGIPIMNLGNEIAKRGIDPHSKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEASHWLYFFPDISLNCISSLFDEYSTIALLDYGQVKDLPEQLRIGYANLVLAIADCDPVRASKSYRELGIDTLSKCENEQQEMLKLAQTMFDTKLPPGVVMLQPFSEESSIKKIAVEAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEALIQAGKLKGKVVRRGGSKRGLVRRLFRRD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1034 509 PANTHER ABC1 FAMILY PROTEIN 348 499 - -
Lal19g1034 509 PANTHER ABC1 FAMILY PROTEIN 12 327 - -
Lal19g1034 509 PANTHER - 12 327 - -
Lal19g1034 509 PANTHER - 348 499 - -
Lal19g1034 509 CDD ABC1_ADCK3-like 107 387 - -
Lal19g1034 509 ProSiteProfiles Protein kinase domain profile. 137 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1034 509 Pfam ABC1 atypical kinase-like domain 107 382 IPR004147 -
Lal19g1034 509 SUPERFAMILY Protein kinase-like (PK-like) 110 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1034 Lal-Chr19 14157766 14165324 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1034 K08869 - gmx:100797467 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1034 19 14157766 14165324 Lal19g1034 19 14157766 14165324 ECH