Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1028 ATGGATTCAACAAAAAGCGCTTCTCCATTCCTTGCTAATCTTCCTAATCGTGGCGTTCTCCCTTCCACCGTCGTTTCTTCCAATTCGGGTGGAATGCGGGTTTATATATCTGTTGGTGATACCTCACCTCCAGAGGGCCAACATATCAAGACAAACCAACAAAACATACTAATCAGATCGCTTACTCTGAAGAAACAAAAGGATGCATCTGACAGTTCGAGAAAGAGGCTTGCTGAAAAGGTTATTGAAAGCAAAACTCCAGCAAAGAGAACAAATAGTCAAATAAACTCTCTACAGGAGGGATCAAGCAGTCAAACATCTCATAGGGACTTCCAGAACTTGACTGTAGAGAGGCTCCGTGCACTTTTGAAAGCTCAAGGTCTTCTGACCAAGGGAAGGAAGGCAAGTCTCATGGATGAGCTTATTTCGCGTCTTAAAGAAGCAAATAGTTGA 453 0.4305 MDSTKSASPFLANLPNRGVLPSTVVSSNSGGMRVYISVGDTSPPEGQHIKTNQQNILIRSLTLKKQKDASDSSRKRLAEKVIESKTPAKRTNSQINSLQEGSSSQTSHRDFQNLTVERLRALLKAQGLLTKGRKASLMDELISRLKEANS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1028 150 MobiDBLite consensus disorder prediction 87 111 - -
Lal19g1028 150 ProSiteProfiles SAP motif profile. 111 145 IPR003034 -
Lal19g1028 150 SUPERFAMILY SAP domain 106 146 IPR036361 -
Lal19g1028 150 MobiDBLite consensus disorder prediction 64 86 - -
Lal19g1028 150 MobiDBLite consensus disorder prediction 63 111 - -
Lal19g1028 150 Pfam Det1 complexing ubiquitin ligase 10 67 IPR018276 -
Lal19g1028 150 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 3 148 - -
Lal19g1028 150 Gene3D SAP domain 87 150 IPR036361 -
Lal19g1028 150 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 3 148 IPR033575 GO:0032434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1028 Lal-Chr19 14121007 14124331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1028 - - lang:109362283 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1028 19 14121007 14124331 Lal19g1028 19 14121007 14124331 ECH