Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1026 ATGGAGCTTGTAGGTTCTATTATTAGATACCTTCTATGCAACATAATTGTTTTAGTAATAGCATGTTTCATCAACTCAAACGTAGTTTTTGGTCATGGAGAACAACCACTTTCTAAGATTGCTATTCACAAAGCTGTCTTTTCTCTTCAGAGCAATGCCTCCATTATTGCCACCCCTTCTCTTCTCGGTGCTAAGGGTGAAGATACTGAATGGGTAACTGTAGATCTTGATTACCCATCTCCTTCTGGAGGTGATTTTGTAGGAGTTTTCTCTCCAGCAAAATTTGATTCATCAACATGTTGGCCTGGAAGTGACCCAAAAGTACAGGGTCCTTTCATATGCTCAGCCCCAATAAAGTACAAGTTTGTGAATTCAATGACAGGAAAAACTTCTTTGAGCTTCCAATTGATCAATCAACGTGCCGATTTCTCTTTTGCACTATTTTCGGGCGGAATTTACAATCCTAAACTTGTTGCAATTTCAAATTCCATATCATTTGCAAATCCTAATGCGCCTCTGTATCCACGCCTTGCCCTAGGGAAGTCTTGGGATGAAATGACAATTACATGGACAAGCGGATATAACGTAAATGAATCTACGCCATTCGTCGAGTGGGGTCCTACGGGGAAAATTCCTGCTCAATCTCCTGCTGGAACATTGACAATTAGTCGTAACAGCATGTGTGGTTCTCCAGCTTCAACTGTTGGTTGGCATGACCCGGGTTTCATACACACAAGTTTCCTTAAAAATCTGTGGCCAAATATAGAGTATACTTACCGACTAGGGCATCTGTTACCTGATGATTCATATATTTGGAGCAAGCAATATTCATTCAAGTCATCACCTTATCCTGGTCAAGACTCATTGCAACGTGTTATTGTATTTGGTGACATGGGGAAGGGCGAGCGCGATGGTTCGAATGAATATAGCAACTATCAACCTGGTTCACTTAAAACCACTGACCAACTCATCAAGGATATAGAAAATATAGACATTGTTTACCACATAGGAGATACTACATATGCAAATGGATACATCTCTCAGTGGGACCAATTCACAGCTCAAGTGGAACCAATTGCATCAAGAGTGCCATATATGACTGCAAGTGGTAATCATGAACGGGACTGGCCCAACACAGGATCCTTTTATGATACTAAGGATTCAGGTGGTGAATGTGGAGTTCTGGCTCAGACCATGTTTTATGTTCCAGCTGAAAACAGAGCCAAGTTTTGGTATGCATCAGATTACGGCATGTTTCGTTTCTGTATAGCTGACTCTGAACATGACTTGAGAGAAGGATCTGAACAATACAAATTTATTGAGAATTGCTTTGCAACAGTAGACAGACAAAAACAGCCATGGTTGATCTTTTCGGCTCATCGCGTGCTTGGATATTCCTCTGATTACTTTTATGGAATGGAGGGTTCATTTGAAGAGCCTATGGGAAGAGAAAGTTTGCAGAAACTTTGGCAGAAATATAAAGTAGACCTTGCATTTTATGGCCATGTCCATAACTATGAAAGGTCATGCCCCATTTATCAGAATCAATGTGTGAATTCAGAAAAATCTCATTATTCTGGCACTGTGAAAGGAACAATTCATGTTGTTGTTGGAGGGGGAGGAAGCCATTTATCAAAATTCAGTGACATAACACCATTCTGGAGTATTTACAGAGACTATGATTGGGGCTTTGTTAAATTGACAGCATTTGATCATTCATCTCTTCTATTTGAGTACAAGAGAAGCAGGGATGGAAATGTTTATGATTCTTTCACCATTTCAAGGGATTACAAAGATGTCTTGGCTTGTGTGCATGATGGTTGTGAAGCAACCACTTTAGCACATTGA 1848 0.4021 MELVGSIIRYLLCNIIVLVIACFINSNVVFGHGEQPLSKIAIHKAVFSLQSNASIIATPSLLGAKGEDTEWVTVDLDYPSPSGGDFVGVFSPAKFDSSTCWPGSDPKVQGPFICSAPIKYKFVNSMTGKTSLSFQLINQRADFSFALFSGGIYNPKLVAISNSISFANPNAPLYPRLALGKSWDEMTITWTSGYNVNESTPFVEWGPTGKIPAQSPAGTLTISRNSMCGSPASTVGWHDPGFIHTSFLKNLWPNIEYTYRLGHLLPDDSYIWSKQYSFKSSPYPGQDSLQRVIVFGDMGKGERDGSNEYSNYQPGSLKTTDQLIKDIENIDIVYHIGDTTYANGYISQWDQFTAQVEPIASRVPYMTASGNHERDWPNTGSFYDTKDSGGECGVLAQTMFYVPAENRAKFWYASDYGMFRFCIADSEHDLREGSEQYKFIENCFATVDRQKQPWLIFSAHRVLGYSSDYFYGMEGSFEEPMGRESLQKLWQKYKVDLAFYGHVHNYERSCPIYQNQCVNSEKSHYSGTVKGTIHVVVGGGGSHLSKFSDITPFWSIYRDYDWGFVKLTAFDHSSLLFEYKRSRDGNVYDSFTISRDYKDVLACVHDGCEATTLAH 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1026 615 Pfam Fn3-like domain from Purple Acid Phosphatase 55 168 IPR040974 -
Lal19g1026 615 PANTHER PURPLE ACID PHOSPHATASE 14 614 - -
Lal19g1026 615 SUPERFAMILY Metallo-dependent phosphatases 290 597 IPR029052 -
Lal19g1026 615 Pfam Iron/zinc purple acid phosphatase-like protein C 531 590 IPR025733 -
Lal19g1026 615 Gene3D - 171 284 - -
Lal19g1026 615 Gene3D - 285 599 IPR029052 -
Lal19g1026 615 PANTHER PURPLE ACID PHOSPHATASE-RELATED 14 614 - -
Lal19g1026 615 CDD MPP_PAPs 290 595 IPR041792 -
Lal19g1026 615 Pfam Calcineurin-like phosphoesterase 291 506 IPR004843 GO:0016787
Lal19g1026 615 SUPERFAMILY Purple acid phosphatase, N-terminal domain 150 282 IPR008963 GO:0003993|GO:0046872
Lal19g1026 615 Pfam Purple acid Phosphatase, N-terminal domain 176 279 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1026 Lal-Chr19 14108851 14113356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1026 46 593 Miscellaneous Gene Families AT2G03450 29.836 3.24e-60 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1026 K22390 - gmx:100814531 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1026 19 14108851 14113356 Lal19g1026 19 14108851 14113356 ECH
Lal14g1462 14 15701127 15704633 Lal19g1026 19 14108851 14113356 LSH