Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1023 ATGACGACTCTCGCACGATTTTCCAGAAGAACCCTAACAACCGCACGCGCAATCTCAAAGCACCACTCGCAACAGCAGATTGCGTGTGCGGGACGCGCTTTTGCGACGGAGGCGGCGAAATCAATAACTCCGTCACCGGATCATGTGAAATGGGATTATAGAGGCCAGAGGAAGATAATCCCGTTAGGGCAATGGCTTCCTAAAGTTGCAGTCGATGCTTACGTGGCACCAAATGTTGTTCTCGCCGGACAAGTCACCGTCTGGGACGGAGCCTCCGTGTGGCCCGGCGCCGTCCTCCGCGGAGATCTTAATAAAATCAGCGTCGGATTCTGCTCCAACGTTCAGGAACGTTGCGTTCTTCATGCTGCTTGGTCTTCTCCCACAGGCCTTCCTGCTGAGACTTTAGTAGAGAGGTACGTGACAATTGGGGCATACAGCCTGTTGAGATCCTGCACCATTGAGCCAGAGTGCATTATTGGGCAGCATTCCATCCTCATGGAAGGTTCATTGGTGGAGACACAATCAATCCTTGAAGCTGGGTCAGTAGTTCCCCCAGGAAGGCGAATTCCAACGGGTGAACTTTGGGCAGGAAATCCAGCCAAGTTTGTTAGGACTTTGACCCATGAAGAAATCTTAGAAATCCCCAAGCTTGCTGTTGCAATAAATTACCTGGGCAGGGATTATTACTCAGAGTTCCTTCCCTATTCCACAGTATATTTGGAGGTTGAGAAGTTCAAGAAGTCTTTGGGTATTTCTGTTTGA 762 0.5013 MTTLARFSRRTLTTARAISKHHSQQQIACAGRAFATEAAKSITPSPDHVKWDYRGQRKIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGASVWPGAVLRGDLNKISVGFCSNVQERCVLHAAWSSPTGLPAETLVERYVTIGAYSLLRSCTIEPECIIGQHSILMEGSLVETQSILEAGSVVPPGRRIPTGELWAGNPAKFVRTLTHEEILEIPKLAVAINYLGRDYYSEFLPYSTVYLEVEKFKKSLGISV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1023 253 SUPERFAMILY Trimeric LpxA-like enzymes 67 228 IPR011004 -
Lal19g1023 253 Gene3D Hexapeptide repeat proteins 58 231 - -
Lal19g1023 253 CDD LbH_gamma_CA_like 68 226 - -
Lal19g1023 253 PANTHER DYNACTIN SUBUNIT P25 2 253 - -
Lal19g1023 253 PANTHER GAMMA CARBONIC ANHYDRASE-LIKE 2, MITOCHONDRIAL 2 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1023 Lal-Chr19 14085947 14088622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1023 K01726 - gmx:100805621 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1452 14 15651181 15654574 Lal19g1023 19 14085947 14088622 LSH