Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0354 ATGAGGATTACAAAGTCAGAGATCAATATGTCTCGAAGATATGATAGCCGTACAACAATCTTCTCCCCTGAAGGGCGTCTTTACCAAGTGGAGTATGCAATGGAAGCCATTGGAAATGCTGGCACTGCAATAGGGATCTTATCAAAAGACGGGGTTGTGCTGGTTGGTGAAAAGAAGGTCACATCCAAGCTACTGCAAACCTCAACTTCCACTGAGAAAATGTACAAGATTGATGATCATGTTGCATGTGCTGTGGCTGGAATTATGTCTGACGCCAACATCTTAATCAATACTGCTAGGGTCCAAGCGCAACGCTACACACTTGCCTATCAAGAGCCCATGCCGGTTGAGCAGTTGGTTCAATCTCTTTGTGATACTAAGCAAGGATACACCCAATTTGGTGGTCTTAGGCCATTTGGAGTCTCATTCCTCTTTGCAGGGTGGGACAAAAACTTCGGCTTTCAACTTTACACGAGTGACCCAAGTGGGAACTATGGTGGCTGGAAAGCTGGGGCTATTGGTGCGAATAACCAGGCGGCACAGTCAATTCTAAAACAGGACTACAAGGATGAAATCACAAGGGAAGAAGCAGTGCAACTTGCACTTAAGGTATTGAGTAAAACTATGGACAGCACAAGTCTGACCTCAGATAAGCTTGAACTGGCAGAGGTTTTTCTATCACCTACCGGAAACGTCAAGTACGAAGTTCGTTCCCCGGAGTCCCTGACTAAGCTGTTGGTTAAGCATGGTGTCACCCAACCAGCAACAGAATCTGCCTAG 780 0.4603 MRITKSEINMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTLAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYTSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDEITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLSPTGNVKYEVRSPESLTKLLVKHGVTQPATESA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0354 259 Pfam Proteasome subunit 39 223 IPR001353 GO:0005839|GO:0051603
Lal19g0354 259 Pfam Proteasome subunit A N-terminal signature 14 36 IPR000426 GO:0006511|GO:0019773
Lal19g0354 259 ProSitePatterns Proteasome alpha-type subunits signature. 14 36 IPR000426 GO:0006511|GO:0019773
Lal19g0354 259 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 10 257 IPR034647 GO:0019773
Lal19g0354 259 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 10 257 - -
Lal19g0354 259 SMART Proteasome_A_N_2 14 36 IPR000426 GO:0006511|GO:0019773
Lal19g0354 259 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 10 258 IPR029055 -
Lal19g0354 259 CDD proteasome_alpha_type_4 12 224 - -
Lal19g0354 259 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 13 228 IPR029055 -
Lal19g0354 259 ProSiteProfiles Proteasome alpha-type subunit profile. 29 246 IPR023332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0354 Lal-Chr19 3882847 3885984 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0354 K02728 - zju:107416726 468.003