Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0309 ATGGCAATTAGCATTAAGATAGCATGTGTGGTTCTGATGTGCATGGTTGTGGTGGGTTCACCCATTGCAGAAGCAGCCATAACATGTGGACAAGTGGTTAGTGGCATAGCTCCATGCCTCTCTTACCTGCAGAACGGTGGAGCCGTTCCTACAACATGCTGCGACGGAATCAGGCGTCTCGTGGCGGCGGCTCAGAGTACTGCTGACAAACAAACAGCTTGCAATTGCCTTAAATCCGCCGCTGCTTCCACCAAATTCGATCCGGCTAATGCAGCTTCACTTCCAGGCAAATGTGGGGTTAATCTCCCTTACAAGATCAGCACCTCCACTAACTGTAATACGTATGTTATTTCTATCCATAGTAACTTTAACGTCGTAACCGGTGTTTTAATTTGCGGTTGCGGTAACGGTTGCGATTACTGCAATTGCGGTCATTGCGGATGTTGCAATGCGGATTGTGGTAACTGTTATGGTTACTGCAATTGCGGTCATTGCGGATGTTGCAATGAGGATTGTGGTAACTGTTATGGTTACTGCAATTGTGGTCATTGCAGATGTTGCGATGCGAATTGCGTCGTTGATGTCTGA 588 0.4728 MAISIKIACVVLMCMVVVGSPIAEAAITCGQVVSGIAPCLSYLQNGGAVPTTCCDGIRRLVAAAQSTADKQTACNCLKSAAASTKFDPANAASLPGKCGVNLPYKISTSTNCNTYVISIHSNFNVVTGVLICGCGNGCDYCNCGHCGCCNADCGNCYGYCNCGHCGCCNEDCGNCYGYCNCGHCRCCDANCVVDV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0309 195 SMART aai_6 29 112 IPR016140 -
Lal19g0309 195 CDD nsLTP1 27 113 - -
Lal19g0309 195 Gene3D - 26 115 IPR036312 -
Lal19g0309 195 PANTHER - 2 114 IPR000528 GO:0006869|GO:0008289
Lal19g0309 195 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2 114 - -
Lal19g0309 195 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Lal19g0309 195 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Lal19g0309 195 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Lal19g0309 195 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Lal19g0309 195 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Lal19g0309 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 115 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0309 Lal-Chr19 3235194 3235781 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0309 1 114 Acyl Lipid Metabolism Gene Families AT5G59310 49.123 2.91e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0309 - - lang:109350172 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0780 14 9673381 9673934 Lal19g0309 19 3235194 3235781 LSH