Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0295 ATGGGGGAGCATGTAGCAGCTTTTCATACTGCTACCAACGCTTTGCAAGCATTAGGAAGAGGATTTGATGTTAACTTTGATACTAGGTTGCTCTATTGTAAAGGAATTTCTGGGTCTAGGGTAGTTGAGATTGATTTAGAACACCCCAGGGACCTGTTATTGTATGATGATGTTGTCATTCCCAATGTTCCTAGGGACATTAGGAACTCTCAAGAGCCTGAAGGGCGTCACAGTTCTGGGGTCTTCACTTTCCAAGAGATGGTTGAATATTTTAATCATAAGGCAAATATATCAGGGAGCTTCGCTCTTGGGCGGTTTAACTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATGCTGCAGCCACAAAAACCCTGTCTTCGGATGGGTTTTACATTCCCCTTGCAAAGGTTCAGCTTACGAAATCCCAATTAATTTTGGAAGAAAATGTCAAAAGGGCCGTCCCAATCTATTGGGATCCACCATCCTTGGCCAGCTTTATTGAAAAATATGGAACACATGTCATTACGTCAATAACTATTGGCGGAAAAGATGTTATTTATGTTAAACAACATCATACTTCACCTTTATCAAAATCGGAGATAAAGAACTATATTGAGGACATTGGAAATCAGAGGGTGTTGAGCCTTTTTCATTCAATAATCAAGGGATTCACCCTCAACCTACGACTGCAACATATCCTACTGGGAAAGAACCATAGTGTGAGAGTTGAGAGCTGGAATAAATGGTTCAATAAGACACTTATAACATTTTGCGTGGTGGCAAAAATTGGATATCACAGCATCCCACAAGTCACACAGTTTAGGTATCTTGGAGTTGGATTTACCATGCAAAGTGATGGAGAAATAAATGGAGATGATGTCACAGTCATTTTCAGAAGAAGAGGAGGAGATGATTTAGAACAAAACCACAGTAAATGGGTAAGAACTGTCAAGTCGTCTCCAGATATCATTGAGATGACTTTCTGTCCTATAACCGATCTCCTGGATGAAAGACCGGGAAAGGAGCATTTGGCTCGTGCTGTTGATAAACCTCCAATTGAAGAACTTCGATATTTCCTAGAGTTTCAGATACCTCGCGTATGGGCTCCTATACAGGACAAGATTCCTGGTCACCAAAGAAAGGAACCTGTGTGCCCTTCTTTGCAATTCAGCATAATGGGCCAAAAACTTTACATCAGCCAAGAACAGCATGGGCACATAAAAAGTGGCGCCGGTACACGTTGGATTACGGTTGGACGTCGGCCAGTAACTGGCTTACGTCTTTGTCTAGAAGGAAGCAAGCAGAATCGTCTGAGTGTTCATCTTCAACACTTGGTATCCCTTCCGAAGATTCTTCAGCCTTATTGGGACAGCCATGTAGCTATCGGTGCTCCCAAGTGGCAGGGACCCGAGGAACAAGATAGCCGTTGGTTTGAGCCTGTTAAGTGGAAGAAATTTTCTCACGTGAGCACTGCACCAATTGAGAACCCTGAAACCTTTATAAGCGATTTCTCTGGTGTCTGCATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTCGGATCGCGCAATATATTGTATATGAAGCTCTTGTATTCTAGGTTACCAGGCTGCACAATCCGACGATCACTGTGGGATCACACTCCGAACAAAGCACTGAAAATTGTCACTGCTTCCAACACTTCGAACCCAGATGAGTCAAGCACTGGTTCAAGAGAAAACGTCGGCAGGAACAAGTTTGTGAAATTTGTCGATTTGTCTGAAATGAGCCAAGGACCGCAAGATCCTCCCGGCCATTGGTTAGTTACTGGTGGGAAGCTTGGCGTTGAAAACGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTAAATTACTGA 1881 0.4296 MGEHVAAFHTATNALQALGRGFDVNFDTRLLYCKGISGSRVVEIDLEHPRDLLLYDDVVIPNVPRDIRNSQEPEGRHSSGVFTFQEMVEYFNHKANISGSFALGRFNSAFSFTGSKHVDAAATKTLSSDGFYIPLAKVQLTKSQLILEENVKRAVPIYWDPPSLASFIEKYGTHVITSITIGGKDVIYVKQHHTSPLSKSEIKNYIEDIGNQRVLSLFHSIIKGFTLNLRLQHILLGKNHSVRVESWNKWFNKTLITFCVVAKIGYHSIPQVTQFRYLGVGFTMQSDGEINGDDVTVIFRRRGGDDLEQNHSKWVRTVKSSPDIIEMTFCPITDLLDERPGKEHLARAVDKPPIEELRYFLEFQIPRVWAPIQDKIPGHQRKEPVCPSLQFSIMGQKLYISQEQHGHIKSGAGTRWITVGRRPVTGLRLCLEGSKQNRLSVHLQHLVSLPKILQPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKKFSHVSTAPIENPETFISDFSGVCIVTGAQLGVWDFGSRNILYMKLLYSRLPGCTIRRSLWDHTPNKALKIVTASNTSNPDESSTGSRENVGRNKFVKFVDLSEMSQGPQDPPGHWLVTGGKLGVENGKIVLRVKYSLLNY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0295 626 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 361 IPR020864 -
Lal19g0295 626 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 626 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lal19g0295 626 Pfam MAC/Perforin domain 105 349 IPR020864 -
Lal19g0295 626 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0295 Lal-Chr19 2969427 2976787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0295 - - aprc:113849343 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0295 19 2969427 2976787 Lal19g0295 19 2969427 2976787 ECH
Lal14g0810 14 10207488 10215833 Lal19g0295 19 2969427 2976787 LSH