Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0293 ATGGCAAACATTAAGATAGCATGTGTGGTTCTTATGTGCATGGTTGTGGTGGGTGCACCCATTGCACAAGCAGCCATAACATGTGGACAAGTGGTTAGTGGTCTAACTCCATGCCTCTCTTACCTGCAGTCCGGTGGAGCTGTTCCCGGAGAATGTTGCAACGGAGTCAAGGGGCTCGTGGCGTCGGCTCAGAGCACCGCTGACAAACAGGTAGCGTGCAATTGCCTGAAATCCGTGGCTGCTTCCACCACATTCAATTCCGGGTATGCAGCTTCACTTCCGGGCAAATGTGGGGTTAACCTCCCTTACAAGATCAGCACCTCCACCAACTGCAATACGTATGTTATACCTCTCTTTGTTCTTTTAATCATTTTCACATGGAAGGAAAATCCGAGACATCAAGTTCTGAAGAGAGGATGCCACTATAGCAGGGCAAAGAGGAAGACTACTATGACTATTATATTACTATGA 471 0.4777 MANIKIACVVLMCMVVVGAPIAQAAITCGQVVSGLTPCLSYLQSGGAVPGECCNGVKGLVASAQSTADKQVACNCLKSVAASTTFNSGYAASLPGKCGVNLPYKISTSTNCNTYVIPLFVLLIIFTWKENPRHQVLKRGCHYSRAKRKTTMTIILL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0293 156 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Lal19g0293 156 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Lal19g0293 156 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Lal19g0293 156 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Lal19g0293 156 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Lal19g0293 156 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 114 IPR036312 -
Lal19g0293 156 SMART aai_6 28 111 IPR016140 -
Lal19g0293 156 Pfam Protease inhibitor/seed storage/LTP family 28 111 IPR016140 -
Lal19g0293 156 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
Lal19g0293 156 CDD nsLTP1 26 112 - -
Lal19g0293 156 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Lal19g0293 156 Gene3D - 25 114 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0293 Lal-Chr19 2941268 2942683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0293 4 113 Acyl Lipid Metabolism Gene Families AT2G38540 49.107 1.08e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0293 - - gmx:100815185 149.058