Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0292 ATGGCTAGCAAGCTGTTTTTCCTAGCAATGATGTGCTTAGCACTTGGTGCAACCAGTCCGGTGACCGAAGCCGCCGTGTCATGCGGTCAGGTGGTGAACAACCTGACCCCATGCGTTTCCTACGTAGTATATGGTGGGAGCATAGTTCCTACACAGTGCTGCAATGGAATCAGGAACCTTAATGGCATGGCTCAGAACACACTAGATCGACAAAACGTGTGCAACTGCATCAAGAATGCTGTTAGTTCGAGTGGATTCACATTCTCTAATTTCAATCTAAACCTTGCTGCTGGTCTTCCTCAAAAATGTGGTGTTATCATTCCTTACCAGATTAGCCCTACTACTGATTGCAGCAGGGTTCGGTAA 366 0.4699 MASKLFFLAMMCLALGATSPVTEAAVSCGQVVNNLTPCVSYVVYGGSIVPTQCCNGIRNLNGMAQNTLDRQNVCNCIKNAVSSSGFTFSNFNLNLAAGLPQKCGVIIPYQISPTTDCSRVR 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0292 121 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 4 119 - -
Lal19g0292 121 ProSitePatterns Plant lipid transfer proteins signature. 99 120 IPR000528 GO:0006869|GO:0008289
Lal19g0292 121 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Lal19g0292 121 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Lal19g0292 121 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Lal19g0292 121 PRINTS Plant phospholipid transfer protein signature 108 119 IPR000528 GO:0006869|GO:0008289
Lal19g0292 121 CDD nsLTP1 26 118 - -
Lal19g0292 121 SMART aai_6 28 117 IPR016140 -
Lal19g0292 121 Pfam Protease inhibitor/seed storage/LTP family 28 117 IPR016140 -
Lal19g0292 121 Gene3D - 25 121 IPR036312 -
Lal19g0292 121 PANTHER - 4 119 IPR000528 GO:0006869|GO:0008289
Lal19g0292 121 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 120 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0292 Lal-Chr19 2922927 2924494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0292 4 121 Acyl Lipid Metabolism Gene Families AT2G38540 46.218 2.19e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0292 - - gmx:100793733 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0818 14 10260087 10261695 Lal19g0292 19 2922927 2924494 LSH