Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0281 ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTAATATGACAATATCCCCAAGGAAGTTGCACTACGATTTGTATTCATTTTCATACCAAGAAGATTCCGACACCCCATTAGTGATAAATGTACTAGCTTCACTGATTGAGAGGAACATGGCCAGAACAAAGAGAATTGAGAAGAACTATTCAAGTATTTTGTTGTCTAAAGCTATGAAAAACAACACAAACATGTTTGATTCTAAGGAGATCCCTGATATGAGCATTGAATCTTATCTAGAGAGAATTTTCAAGTACACTAGGGCAGGACCTTCTATCTATGTAGTAGCATATGTTTATATTGACAGGTTTTGCCATAACAATCCTGAGTTTTGGATCAATGATACAAATGTGCATAGGTTTCTCATAACAACTATAATGGTGGCTTCTAAGTATGTGGAGGACATGAATTACAGAAACTCATATTTTGCAAAAGTTGGTGGATTAACAACAAAAGAATTGAATGAGTTGGAGCTAGAATTTTTGTTTATGATGGGTTTCAAATTGCATGTGAATGTGAGTGTGTTTGAGAGCTATTGTTGCCATTTGGAGAGAGAAGTTAGTATTGGAGGAGGGTATCATATTGAGAGAACTCTACATTGTGCAGAAGAAATTAAAACAAGGCATAAAAAAGATAGAGATTATACACAAATTGGACGTGTAATGTTGTAG 699 0.3491 MASSSSSSSSNMTISPRKLHYDLYSFSYQEDSDTPLVINVLASLIERNMARTKRIEKNYSSILLSKAMKNNTNMFDSKEIPDMSIESYLERIFKYTRAGPSIYVVAYVYIDRFCHNNPEFWINDTNVHRFLITTIMVASKYVEDMNYRNSYFAKVGGLTTKELNELELEFLFMMGFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLHCAEEIKTRHKKDRDYTQIGRVML 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0281 232 Pfam Cyclin 57 178 IPR013922 GO:0000079|GO:0019901
Lal19g0281 232 PIRSF PREG 11 229 IPR012389 -
Lal19g0281 232 SUPERFAMILY Cyclin-like 88 179 IPR036915 -
Lal19g0281 232 PANTHER CYCLIN-U2-1 12 231 - -
Lal19g0281 232 Gene3D - 26 227 - -
Lal19g0281 232 PANTHER UNCHARACTERIZED 12 231 IPR013922 GO:0000079|GO:0019901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0281 Lal-Chr19 2853884 2856288 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0281 - - lja:Lj0g3v0114179.1 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0281 19 2853884 2856288 Lal19g0281 19 2853884 2856288 ECH
Lal2g1672 2 19061777 19064130 Lal19g0281 19 2853884 2856288 PCT
Lal9g1346 9 14904029 14906284 Lal19g0281 19 2853884 2856288 PCT
Lal19g0281 19 2853884 2856288 Lal2g1672 2 19061777 19064130 PCT
Lal19g0281 19 2853884 2856288 Lal9g1346 9 14904029 14906284 PCT