Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0267 ATGCAGAGAAACAGACGCAATTCCAATCATTCCACCGCAACTCCAAATTCCGATGAGTCGGAAACCGCCGCAAAAGGCAAACCCCGTCACAGCGGCGTATCGGAGTATGAGAAACAGAGGCTCTCGAGGATCGCGGAGAACAAAGCTAGGTTAGAGGCTTTGGGTTTGTCCAGATTGTCCTCTTCCTTCAACAATAAGGGGAAAAAGAAAGTTCAAGATGAAGATGATGAATATAAACCCGAGAATGAAGAACCCGGATCAAGTTCTTCCAGTGATGAAGATCATTATGAAAAAGATGAGGACTTTGAAGCTGGGAATTCATCTGGGTCAAGGAAAAGGAAGGTGAAGAATAAATGTTTAAAAATGAAAGCTAAGATCTCTCGAAAGAAGTGTTGTAGTAGTAATATGGAGTATATTGATGATGAAGATGAAGCTTTGAGGCAGGCCATTGCTCTTTCCCTACAAGGTTCGGCAGAAGATCCATATTTTTCTGACAAGAATGTAGTGAACATTACTGGGGCTGAGAAGGGAAACATCCACGTTGAAGAAGATAAGGGTAGAAAGAAGAGCAAAAAATCGGTTTGTACTGTGATTTCTGTTCACAGATTTACTAGTCGGCTGAAAATGACGGAGGATGAACTCATTGTACATTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACTGTATCGGTAAGGGATCTACAGAGGGCAGCTAAAGTTCATGATTTTATATGGACAGACAAAGAGTTGGTTGATATGATTCGCTTCTTTGACAGTGATGGAGATGGAAAGCTTAGCTTTGACGATTTCAAGAAGATTGTTGGTCTTCAAATTCGTGATGGAACCAAGGATGACAAGATATGTTATATTCCCAGTGCACTTTTTGGTATCACTTTTGATGGGTCGACTTCACTTGATCGGTCATTGCTTTCGTCTGTGTATGTCTTAACTTTAGCTGTGCTGAGTTCTAAATTTAACCGTGGAGCCACTCGACCAATACCTCGCTTGGTTCGAATTCCCGCAAAGTTTGGCCTCCTTCCACTCCGAGCTTTTCCGGGATCTCCAAACCCTAAGGGCCATTCTCCATTGCCTGTTCTTAGAACTAGAGCAGCCATGGCAAGCTTGCACAAAATTGTGAAGAAGAAGAACTAG 1152 0.4253 MQRNRRNSNHSTATPNSDESETAAKGKPRHSGVSEYEKQRLSRIAENKARLEALGLSRLSSSFNNKGKKKVQDEDDEYKPENEEPGSSSSSDEDHYEKDEDFEAGNSSGSRKRKVKNKCLKMKAKISRKKCCSSNMEYIDDEDEALRQAIALSLQGSAEDPYFSDKNVVNITGAEKGNIHVEEDKGRKKSKKSVCTVISVHRFTSRLKMTEDELIVHFFQLDEAGKGTVSVRDLQRAAKVHDFIWTDKELVDMIRFFDSDGDGKLSFDDFKKIVGLQIRDGTKDDKICYIPSALFGITFDGSTSLDRSLLSSVYVLTLAVLSSKFNRGATRPIPRLVRIPAKFGLLPLRAFPGSPNPKGHSPLPVLRTRAAMASLHKIVKKKN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0267 383 ProSitePatterns EF-hand calcium-binding domain. 258 270 IPR018247 -
Lal19g0267 383 ProSiteProfiles EF-hand calcium-binding domain profile. 245 280 IPR002048 GO:0005509
Lal19g0267 383 Pfam Ubiquitin interaction motif 141 156 IPR003903 -
Lal19g0267 383 Pfam EF-hand domain pair 213 274 IPR002048 GO:0005509
Lal19g0267 383 MobiDBLite consensus disorder prediction 54 116 - -
Lal19g0267 383 MobiDBLite consensus disorder prediction 67 110 - -
Lal19g0267 383 MobiDBLite consensus disorder prediction 1 41 - -
Lal19g0267 383 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 141 160 IPR003903 -
Lal19g0267 383 MobiDBLite consensus disorder prediction 1 21 - -
Lal19g0267 383 SUPERFAMILY EF-hand 198 274 IPR011992 -
Lal19g0267 383 CDD EFh 221 274 IPR002048 GO:0005509
Lal19g0267 383 SMART efh_1 249 277 IPR002048 GO:0005509
Lal19g0267 383 MobiDBLite consensus disorder prediction 22 41 - -
Lal19g0267 383 Gene3D - 181 308 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0267 28 274 EF-hand Containing Proteins AT1G73440 37.109 3.87e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0267 - - gmx:100806103 299.671