Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0262 ATGGTGCCAAGGAGATGTGGGAAGTTTTTCTCAAATGGGGCAGTCATAGAGGTCGGCATTCCCTCTAGGTTGGACAAGTATGCTAAGCGGTTTGGCTTTGTGCATTTCCATGGGGTCTCCAATTCTAAACTTATGGTAGAAAAATTGGACATAATCTGGATTGACTCTTATAAAATTTGGGTTAATATTCCCAAATATGGGAGGAAGTCTACCCTATCCCATCCAAGGAACGACTCGACCTTTAAACCCTCCACCAACCTTCATGTGTCTTCTAACAACAATGAGTCTTCCTCCGGAATAGTGGGTTCTCCTTCAACCGGCCTTCGGGATTCTAGGAACTTTGCGGACGTGGTCAAATTCGGTCATCCCTTGTCTCTATCCCCCCAACCGCCTTTACCATTGCCTTTGGGTCCCTCGGTGGATTTGGAGTTCCAATCCACAGAACAATTTCCCCTATGGCTTCGCAACAGCTACTTCGGTATTGTCCATGACAATATAGACCCGGAAGGTTTAAAAGATAAATTGTTCTTGGACGGTTTCTATTCGATCAACTGCACCATCCTTGGTGGGCGACAGGTCTTACTTCGCTCCGGAGAAGAGGGTGACCTTGAGGCCTTCATTCATGGGGAGCCTGAATGGTTCGACAGTCGGTTTTGGGTTCTCCGTAAATGGGAACTGGCGGATGTTTCCTCGGAACGGTTTGCATGGATTCGTTGCTACGGAATTCCCTTACATGCATGGGAAAATATGCTCTTTCACAACCTCGCTTCTATATTTGGCACTTATCTTGGCCAAGATAATTGTACTATTTCCAAGCATACCTTGGATGAACATTCTTCATCAAAAATCTCTTCTGATTCCTGTTCATCCGATTTAGTCTGTTTCTGGATCGACTATGCTTTGAACGATCAAAATTCTGCCTGGGAGGTTGATGACGAAGTTGATGATGCAGTGGGTGGCTTTGAGTCGGGTTTGGGTGGTTTTTTCAGGGTCGTGGCCACCAACGTGATCCCTGATTTAGAAGTTTCGGTGGTCTCCAATGGGGACGTGGCTCCTCCCAACGGTTCCACTGCCTCGAATCTTGCATATGGGAGTGTGTTGGAAATTAATGGGCCTTTGGTTTCAGGGAATCTTATTCATTGCATGGGTGATTCCATTAAAGGTGGAACGATGCCTGGTCTTGCTAATTGTGGGGAGGATTTTAATGTGCCACTTTTCTCTCATGATGATTCCAACATATTGGACCCCACAACTTTTAAAGTGGACAACTTGAAAGAAGTAGCGGGGTCCACAATTTTTAAATCCCCTGTGACAGTTACTGATTTTTCTGGAAGGAATAATTATAGTGTTATGAATTTTGAGCCTATCCATGATGGTGCAATTATTACTCCTATTTTGAACTTGGATTCTGGTCTTTTGCATGATTGTTCTCAGGTTGGTCCCACCGCCAGTATTGATTGTTCTCAATCTCCTATTTCCGTGGACCACTCTCCTTCTTTCGTGGACCCCTCTCCCCCTCCACTTCACCTCAATTCTCAATCACTTTCTCATCAAAAATTATCCTCTCCAACCCCTAGTATGTTAGGTCCCATTCTCCCAACCCCTTACCCCTTAAACACTCTCCATAAACCCCTCCACCCACCTCCCAAATATAAACATTCTTTTCCTAAATCTCCAAACCCTAACACTCAACCCCATACACTCTCTAAATCCAACCCTTCCAATATGCAACCTCTTCCCCCTCACGGTGGTAAGTTTGATATTTGGATCGATTTGACTAACGTGCCTCCTCTTGTCATCTCCTCCAAACTATCTAATAGGAAGTCTCAATCTCCCTCTTCTTGCTCAAAATTCACTATTCTTACCCGTTCCAAATCCAGATCGTTGGATGGGTTAAATGATAGGGAGAGAAGATTGCTTGAAGCCAAAGATGTTTGGGATTTCGGCAAGACTTTGGGTGTGACTTCTTCTTCATCTCACCCTAATGATATTCTACATTTGGCTCACTTAGATTCTTCAGTTGACAATACTCGCAACTCTAAAGGTAGTGCTTCTGTTCCGCAACATGGGAAGGTTGTACAGATGGTTTCTTGA 2094 0.4451 MVPRRCGKFFSNGAVIEVGIPSRLDKYAKRFGFVHFHGVSNSKLMVEKLDIIWIDSYKIWVNIPKYGRKSTLSHPRNDSTFKPSTNLHVSSNNNESSSGIVGSPSTGLRDSRNFADVVKFGHPLSLSPQPPLPLPLGPSVDLEFQSTEQFPLWLRNSYFGIVHDNIDPEGLKDKLFLDGFYSINCTILGGRQVLLRSGEEGDLEAFIHGEPEWFDSRFWVLRKWELADVSSERFAWIRCYGIPLHAWENMLFHNLASIFGTYLGQDNCTISKHTLDEHSSSKISSDSCSSDLVCFWIDYALNDQNSAWEVDDEVDDAVGGFESGLGGFFRVVATNVIPDLEVSVVSNGDVAPPNGSTASNLAYGSVLEINGPLVSGNLIHCMGDSIKGGTMPGLANCGEDFNVPLFSHDDSNILDPTTFKVDNLKEVAGSTIFKSPVTVTDFSGRNNYSVMNFEPIHDGAIITPILNLDSGLLHDCSQVGPTASIDCSQSPISVDHSPSFVDPSPPPLHLNSQSLSHQKLSSPTPSMLGPILPTPYPLNTLHKPLHPPPKYKHSFPKSPNPNTQPHTLSKSNPSNMQPLPPHGGKFDIWIDLTNVPPLVISSKLSNRKSQSPSSCSKFTILTRSKSRSLDGLNDRERRLLEAKDVWDFGKTLGVTSSSSHPNDILHLAHLDSSVDNTRNSKGSASVPQHGKVVQMVS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0262 697 PANTHER RNA RECOGNITION MOTIF 15 275 - -
Lal19g0262 697 MobiDBLite consensus disorder prediction 70 107 - -
Lal19g0262 697 MobiDBLite consensus disorder prediction 73 107 - -
Lal19g0262 697 MobiDBLite consensus disorder prediction 506 527 - -
Lal19g0262 697 CDD RRM_SF 8 62 - -
Lal19g0262 697 MobiDBLite consensus disorder prediction 556 578 - -
Lal19g0262 697 MobiDBLite consensus disorder prediction 494 582 - -
Lal19g0262 697 Pfam Domain of unknown function (DUF4283) 183 275 IPR025558 -
Lal19g0262 697 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 15 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0262 Lal-Chr19 2572615 2574962 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0262 - K06261 pvu:PHAVU_007G108700g 122.864