Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0218 ATGAACGGCGGTGGAGGCGACTTTACGCCGCCACCTCCTACCAACGGCGGCGAGTATCTCCTCTCTCTCATCCAAACACCCCACAACCCACCTCTTCAATTTCATCAACCACCACCACAACAATCTCCCACCACCACCGCCGATCCCGCCGTCGCAGTCATGGGCCCCACCATCCACGTGTCACCACCGTGGCAAATGAACGGTCCAGATCATCCCCAACAATTTCATCATCATCATCATTATCTTCCAAATTGGTCCCTTTACCAATCAAACTTATTCGGATTACCCCATAACCCGTTTCCACCGATTTGCGACGCTTTTTCTTCGACCCAAATTTCCATCGCTAATGATCTCAGAAAATTAGGGTTTTTCATTGAAGGGAATAACAATAACAACAATAACATGGTTGAAGCTTTGCTTCAACATCACGAATTGCAGTTAAAGTTTGGGTCTTTACCCATTGATGGTTTTGCCCATGATCCTCAATTTCCATCCAATGATGATTCCTTGCTAAATTTGAAGTTTAATTACAATGGGTATGATAGGAATTTGCATTTGGAAAACACTAACCCTAACCCTAATTTGAGTTCCAATGGCAATGTTGTTGAACATGACAGGTTTGGGGTTATGGTTGGGAGAGGGAATAGTGATTTTCATGGTGTTGGGAATTTTAGGTCTGAACCAAGTAGAAGGAAGGATCAATGGGGTTCTGGTACTAGACGAAATGGTTCGGAGGTTAGTTTTGGTGATTTGGGTGTGAGGAAAGAGAGTGTGCATGCTACGGAAGAAAACTTGAGAAGAGGCGGCAATGTGGGGCGCGAAATTAGGCTTCCTGAACAGGTTGATCACCCTGGACCTCCATCGGGGAGTAACCTACATTCGGTCTCGGCTTCTGATATCGAAGAGCGTAGGTCGAAGTTCCAGAGCAATGTTGTTGGAGATGGTGTTAGAGATAAGTTTAAAGGAGATTGCAGATTGAAGATGGAAGATGTTGCTGACTATGGTAGAGGTAGTAGTGGTGGCGGCGATGAAGTTGATATCCTTCGGGAGCAGTTAGGTGATTCATTGTTGCTTGAGGATGTGCCTGAAGAGAACAATAACTCGAAGCAACAGCGTCGAGATAAGGATGCCAGACAATCAGATTTAAGAGGAGAATGGCTACTGAGCCAGCGAGCGAGAATGTATAAAAGACAGATGATATGTCGGCGGGACATAGATAGTCTAAATGGTCCTTTCCTTTTGATGTATCAATCTCTAATACCTCCTGATGAAGAAAAGGTGAAGCAAAAGCAATTGTTGTCATTATTGGAGAGGTTAGTTATCAAGGAGTGGCCACAAGCTCGGCTTTATCTCTATGGATCATGTGCTAATTCATTTGGCGTTTCCAAGAGCGACATTGATGTTTGCCTTGCAATTGAGGAAGCACACATGGACAAATCTAAGCTCATAATGAAATTGGCAGATATTTTGCAATCAGATAACCTGCAGAATGTACAGGCATTGACACATGCAAGGGTTCCCATAGTAAAACTCATGGATACAATGACTGGTATCTCTTGTGACATATGCATTAACAATCTCTTGGCTGTTGTAAATACGAAGCTTCTTTGGGATTATTCCCGGATAGATGCAAGGTTAAGGCAGTTGGCATTTATTATCAAACATTGGGCAAAGTCAAGAAGAGTGAATGAAACTTACCATGGGACTTTATCTAGCTATGCGTATGTCTTGATGTGCATTAATTTTCTACAACAGCGAAGACCTGCTATCCTACCATGCTTACAGGAGATGAAGACAACATACTCTGTGACCGTGGACGATGTTGATTGTGCTTTCTTCGATCAAGTTGAAATGCTGTATGATTTCGGACACCGTAACAAGGAAACTATTGCTCAACTTGTGTGGGGATTTTTCCATTATTGGGCATATTGTCATGATTATACAAATGCTGTTATATCTGTACGTACAGGAAGCATAATCAGTAAGCGAGAGAAGGACTGGACAAGAAGGATCGGTAATGATCGCCACTTGATATGTATAGAGGATCCTTTCGAAATGTCTCATGATCTTGGTCGGGTAGTAGACAAACATAGCATCAAAGTTCTAAGGGAAGAGTTTGAACGCGCTGCTGATATCATGCAATTTGATCCAAATCCATGTGTTAAACTTTTTGAGCCCTATGTTCCTAGTTGA 2193 0.4291 MNGGGGDFTPPPPTNGGEYLLSLIQTPHNPPLQFHQPPPQQSPTTTADPAVAVMGPTIHVSPPWQMNGPDHPQQFHHHHHYLPNWSLYQSNLFGLPHNPFPPICDAFSSTQISIANDLRKLGFFIEGNNNNNNNMVEALLQHHELQLKFGSLPIDGFAHDPQFPSNDDSLLNLKFNYNGYDRNLHLENTNPNPNLSSNGNVVEHDRFGVMVGRGNSDFHGVGNFRSEPSRRKDQWGSGTRRNGSEVSFGDLGVRKESVHATEENLRRGGNVGREIRLPEQVDHPGPPSGSNLHSVSASDIEERRSKFQSNVVGDGVRDKFKGDCRLKMEDVADYGRGSSGGGDEVDILREQLGDSLLLEDVPEENNNSKQQRRDKDARQSDLRGEWLLSQRARMYKRQMICRRDIDSLNGPFLLMYQSLIPPDEEKVKQKQLLSLLERLVIKEWPQARLYLYGSCANSFGVSKSDIDVCLAIEEAHMDKSKLIMKLADILQSDNLQNVQALTHARVPIVKLMDTMTGISCDICINNLLAVVNTKLLWDYSRIDARLRQLAFIIKHWAKSRRVNETYHGTLSSYAYVLMCINFLQQRRPAILPCLQEMKTTYSVTVDDVDCAFFDQVEMLYDFGHRNKETIAQLVWGFFHYWAYCHDYTNAVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFEMSHDLGRVVDKHSIKVLREEFERAADIMQFDPNPCVKLFEPYVPS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0218 730 Gene3D Beta Polymerase, domain 2 429 542 IPR043519 -
Lal19g0218 730 CDD NT_PAP_TUTase 430 540 - -
Lal19g0218 730 Pfam TUTase nucleotidyltransferase domain 424 522 IPR045100 GO:0016779
Lal19g0218 730 Pfam Cid1 family poly A polymerase 630 688 IPR002058 -
Lal19g0218 730 MobiDBLite consensus disorder prediction 1 48 - -
Lal19g0218 730 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 74 729 - -
Lal19g0218 730 MobiDBLite consensus disorder prediction 219 309 - -
Lal19g0218 730 PANTHER POLY A POLYMERASE CID PAP -RELATED 74 729 - -
Lal19g0218 730 MobiDBLite consensus disorder prediction 224 238 - -
Lal19g0218 730 MobiDBLite consensus disorder prediction 365 380 - -
Lal19g0218 730 MobiDBLite consensus disorder prediction 358 380 - -
Lal19g0218 730 SUPERFAMILY Nucleotidyltransferase 418 556 IPR043519 -
Lal19g0218 730 Gene3D - 543 711 - -
Lal19g0218 730 MobiDBLite consensus disorder prediction 255 280 - -
Lal19g0218 730 SUPERFAMILY PAP/OAS1 substrate-binding domain 545 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0218 Lal-Chr19 1981653 1986828 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0218 - - adu:107475742 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0911 14 11547175 11552600 Lal19g0218 19 1981653 1986828 LSH