Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0212 ATGGAGGTTTTTCCAAAAGTGTTAGTTCTTGGTCCTCCAACATGCTATGAAACTCTTCAACATATTTACTCTCACAAATTCAATTTCATAAACCCCAATTCTTCAGATCTCTCACTTCATCAATTCATCATTTCCAATCACCCTCCTTCCATTAGAGCCATACTCTGCAGTGCCTCCTTCACCCTCACCGCCGATTTCCTCCGCCTCTTCCCGTCTCTCGGCCTTGTCGTCACCACCAGTGCCGGCACGGATCACATTGACCTGAACGAGTGTCGCCGCCGTCAAATCAATGTTGCCGGTGCCGGAGGATTGTTGTCGGAGGATGTTGCTGATAAGGCGGTGGCTTTGCTCATTGACACGATGAGGAAAATTTCTGCGGCGGATCGATATGTACGGACGCGGAATCACGGTGGCGAGTGGGATTTTCCTCTTGGTTATAAGCTATCAGGCAAGCGAGTTGGGATTGTTGGATTGGGAAGTATTGGCATGGAAGTTGCAAAGAGGCTAGAATCTTTTGGTTGCATAATATTGTACCATTCTAGGCATCAAAGGTCCTCTGTTTCATACCCTTTTTATTCCAGTATTGTTGACCTTGCAACTAATAGTAATGCACTTGTGATTTGTTGTGCACTTAATGAGCAAACAAAACACATAATCAACAGTGAAGTCCTTTTGGCATTAGGAAAAGAAGGATTTATTGTCAATGTTGGGAGAGGAGGTCTTATTGATGAAAATCAATTGGTAAAGTGTTTGATAGAAGGAGAAATTGGAGGTGCTGGTTTAGATGTGTTTGAGAATGAACCTCATGTTCCTCAAGAGCTCCTTGCATTGGACAATGTGGTTTTATCTCCACATTGTGCTGCTTTTACTTCAGAATCTGTCATGAGTCTGTGTGAACTTGTGGGAGGGAATTTAGAATCTTTCTTCTCAAATATGCCCATAATTACTCCATTGATGCTTGATTGA 966 0.4317 MEVFPKVLVLGPPTCYETLQHIYSHKFNFINPNSSDLSLHQFIISNHPPSIRAILCSASFTLTADFLRLFPSLGLVVTTSAGTDHIDLNECRRRQINVAGAGGLLSEDVADKAVALLIDTMRKISAADRYVRTRNHGGEWDFPLGYKLSGKRVGIVGLGSIGMEVAKRLESFGCIILYHSRHQRSSVSYPFYSSIVDLATNSNALVICCALNEQTKHIINSEVLLALGKEGFIVNVGRGGLIDENQLVKCLIEGEIGGAGLDVFENEPHVPQELLALDNVVLSPHCAAFTSESVMSLCELVGGNLESFFSNMPIITPLMLD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0212 321 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 4 317 - -
Lal19g0212 321 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 IPR029752 -
Lal19g0212 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 106 288 IPR036291 -
Lal19g0212 321 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 287 IPR006140 GO:0051287
Lal19g0212 321 Gene3D - 106 290 - -
Lal19g0212 321 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 5 138 - -
Lal19g0212 321 CDD HPPR 5 310 - -
Lal19g0212 321 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 51 312 IPR006139 GO:0016616|GO:0051287
Lal19g0212 321 Gene3D - 43 313 - -
Lal19g0212 321 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0212 Lal-Chr19 1945836 1948905 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0212 - K15919 gmx:100776772 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0212 19 1945836 1948905 Lal19g0212 19 1945836 1948905 ECH