Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0095 ATGGGATCAAAGAAGGATATTTCCTCAGTGAATGTTTTAATTGGATGGTTGAACAAGAAACCTATGAAAGTGAAGATATTTTTGGGGTTCTTGTTTGCTCTTTTTGCTTTGGTGATTCTAGACATTATTGTCAAAGATAAGAGTTATTTCTTCGTAGTCTCTGAAGCAGTATATATTATAGGGACTATTGTCCTTTTATACAAGCTTTTCAGGCAGAAATCATGTTCTGGTGTATCACTCAAGACACAAGAACTCATGGCTATATTCCTAGCAGCAAGGTTAATTTGTAGCATCTTCATTGAAGCTAACATTCACACTTTGCTAGATCTGACATCTCTATTGTCAGTATTATTGGTTATATGGATGATAAGATTCAGGTTGAAGTCATCATATTTAAAGGAGTTGGATACCCTTCCACTATCCTTTGTGGTGGTACCTTGTGCAGTCATTGCAGTTATAATACACCCTGCTACAATTCAAATTCGCTTCTCTCGAACACTTTGGGCATTCTCTATATATTTGGAAGCAGTTTCAGTTCTCCCTCAACTTCGTTATATGCAAAATGCAAAGATGATTGAAACCTTGACAGGAAAATATGTATTTGCTCTTGGTGTTTCAAAATTCTTTGGATTGGCTCATTGGATTATTCAGATTTATAAGACTCGAGGAGCATACTTTTTTCTTATTGGGAGTGGCTATATTTGGTTCTCAGTAGCTTTTCTGGCAGAGATGGTTCAATCGTTTATCTTAGCCGATTTCTGTTACTATTACATAAAGAGTTATATGCAAGGACAACTTTTGAGGAAGATGCCTATTTAA 819 0.3565 MGSKKDISSVNVLIGWLNKKPMKVKIFLGFLFALFALVILDIIVKDKSYFFVVSEAVYIIGTIVLLYKLFRQKSCSGVSLKTQELMAIFLAARLICSIFIEANIHTLLDLTSLLSVLLVIWMIRFRLKSSYLKELDTLPLSFVVVPCAVIAVIIHPATIQIRFSRTLWAFSIYLEAVSVLPQLRYMQNAKMIETLTGKYVFALGVSKFFGLAHWIIQIYKTRGAYFFLIGSGYIWFSVAFLAEMVQSFILADFCYYYIKSYMQGQLLRKMPI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0095 272 Pfam ER lumen protein retaining receptor 74 217 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 7 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal19g0095 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 7 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0095 Lal-Chr19 735286 740103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0095 1 272 Miscellaneous Gene Families AT3G25160 56.250 2.80e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0095 K10949 - gmx:100790733 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0210 14 2372775 2378316 Lal19g0095 19 735286 740103 LSH