Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0083 ATGTATGCTGATCGAGTGGAGAGCGGAGCTAGGAGATCCGTGAAGGAACGTCTTCACGGCAATGGTAGTGATTCTACTCGCCAACAACGCCAAATCACTGGAAAGAGGCAGAGGCAAGATGACAAGTGGGAACATGATCTCTTTGATGATGATGAACCCCAGAACACTAATCGTAAAGTTACTGCTCAAGATCTTCGCTATAAGCTTCAAAAGAAAGGTCTTCAACCTGCAGTTCAAAGTGGAAAAAGTTCTGCTCCCATCGTGCGTGATCTCCGTGAAAGGCTATCAGGGACAGTGACTCCACAACCTAAAAACTCTGATCCACCAAAGACCAAAGTGGTTGCTAAACCAAGCAGTAAAAGTGTTGGTGTTGATGCTCATGCAGTACAAATCCAAAGACCAAAACCAGCTCCAAAAAAGTTATCACAGAAGGTTGATACTTCAGTGGATGAATTTTTGCAGTCCTTGGGTCTGGAAAAGTATCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAGGATCTCAAGGCTATGGGTATACCGATGGTGCGGGCCGAGAAAGAAGATACTTTTAGCGTTGGAGTCCAAAGTCTGAGATTTAGTGTTGAAGATGAAATGATGATATCCTTATGTAGAAGGACAGTGGTGGTGGATGGATCAACAACTCAACTTAGTGTAATAGCTTGGCTCTTCTAA 720 0.4333 MYADRVESGARRSVKERLHGNGSDSTRQQRQITGKRQRQDDKWEHDLFDDDEPQNTNRKVTAQDLRYKLQKKGLQPAVQSGKSSAPIVRDLRERLSGTVTPQPKNSDPPKTKVVAKPSSKSVGVDAHAVQIQRPKPAPKKLSQKVDTSVDEFLQSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPMVRAEKEDTFSVGVQSLRFSVEDEMMISLCRRTVVVDGSTTQLSVIAWLF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0083 239 ProSiteProfiles SAM domain profile. 144 188 IPR001660 GO:0005515
Lal19g0083 239 CDD SAM_superfamily 148 188 - -
Lal19g0083 239 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 106 - -
Lal19g0083 239 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 125 191 - -
Lal19g0083 239 Gene3D - 146 195 IPR013761 -
Lal19g0083 239 PANTHER OSJNBA0060P14.15 PROTEIN 125 191 - -
Lal19g0083 239 PANTHER OSJNBA0060P14.15 PROTEIN 1 106 - -
Lal19g0083 239 MobiDBLite consensus disorder prediction 94 126 - -
Lal19g0083 239 MobiDBLite consensus disorder prediction 31 57 - -
Lal19g0083 239 SUPERFAMILY SAM/Pointed domain 145 191 IPR013761 -
Lal19g0083 239 MobiDBLite consensus disorder prediction 1 59 - -
Lal19g0083 239 MobiDBLite consensus disorder prediction 1 23 - -
Lal19g0083 239 Pfam SAM domain (Sterile alpha motif) 146 188 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0083 Lal-Chr19 637571 643918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0083 37 190 Glycosyltransferase AT3G07170 58.710 1.64e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0083 - - gmx:100784706 283.108