Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0069 ATGACCAAAACAGTTACAAGTATCCATTGGTTCTTGTTTCATGTTTACTTCAGCTATGTCTTGTTGCTAACCCAATCAGCACCTCAAACTTCCCTTGTAACTCATGTTCCAGGCTTCAATGGTTCTCTTCCTTCCAATCACTATGCTGGGTATGTGACAGTGGATGAAAATCATGGAAGGAACTTGTATTACTATTTTGTTGCATCAGAAGGCAAACCATCTGAGGACCCGGTTGTTCTGTGGCTTAATGGTGGCCCCGGGTGCTCTAGTTTTGATGGCTTCGTATACGAGCATGGTCCTTTTAATTTTGAAGCCGCAAAGACAAGGGGAGATCTGCCAACGCTGCACCTCAATCCACACAGCTGGTCTAAGGTTTCCAATGTTTTGTATTTGGATTCTCCTGCTGGTGTGGGGTTCTCATACTCAAAGAATGAAACCGATTACATAACCGGTGACACAAAGACTGCCTCTGATACACATGCCTTTCTCCTTAAGTGGTTTAATCTATATCCTGAGTTCCTTCCAAACCCATTTTTCATTGTCGGAGAGTCATATGCTGGAGTTTATGTGCCTACTCTCGCTTATGAAGTAATGAAAGGTAGAATTGATGCTGGTGCAAAGCCCATTCTGAATTTCCAGGGTTACATGGTTGGAAATGGTGTTACAGATGAACAAATTGATGGCAATGCTCTTGTGCCATTTGCACATGGGATGGGTCTTATCTCAGATGATCTGTTTGAGGAGGCCAATGTTGAGTGCAAAGGGAATTTCTACAATTCTGTGAGTGATAATTGCTCTAGCAAACTTGAAAAAGTTGATCAGGCCATTGATGGGTTAAACATATATGACATTCTAGAGCCATGCTATCATGGGACAGAGGCAGAGGAGTTTTCAGCATCCTCCTATATTAGGTTGCCATCTAGCTTCCGGAAACTGGGTGAGACTGAAAGACCTCTTGCCGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCTCTGAGAGCACCTGTCAGAGATGGAATCGTACCAACTTGGCCACAACTGAGCAATAGCAACAATGTTCCATGCACTGACGATGAGGTCGCAAACGCATGGTTGAACAATGCAGAGGTCAGGAAAGCAATTCACACGGTAAAGGAAAGTGTGGTCAGTAGCTGGGACTTATGTACAGACAGGATTTCATTCAATCATGATGCTGGGAGCATGATCAAGTTCCACAAGAACCTAACTTCCAGAGGATACCGAGCCCTTATATACAGCGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACAAGATCAATCGGATACAAAATTGTTGATGAATGGAGGCCTTGGACATCCAATGGTCAAGTTGCTGGGTTTACACAAGGATATGACAAAAATCTTACTTTTCTGACCATAAAGGGAGCTGGGCATACTGTTCCTGAATATAAACCACGAGAGGCATTGGATTTTTATAAACGCTTTCTAGCTGGATTACCAATCTGA 1500 0.436 MTKTVTSIHWFLFHVYFSYVLLLTQSAPQTSLVTHVPGFNGSLPSNHYAGYVTVDENHGRNLYYYFVASEGKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTRGDLPTLHLNPHSWSKVSNVLYLDSPAGVGFSYSKNETDYITGDTKTASDTHAFLLKWFNLYPEFLPNPFFIVGESYAGVYVPTLAYEVMKGRIDAGAKPILNFQGYMVGNGVTDEQIDGNALVPFAHGMGLISDDLFEEANVECKGNFYNSVSDNCSSKLEKVDQAIDGLNIYDILEPCYHGTEAEEFSASSYIRLPSSFRKLGETERPLAVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSNNVPCTDDEVANAWLNNAEVRKAIHTVKESVVSSWDLCTDRISFNHDAGSMIKFHKNLTSRGYRALIYSGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWTSNGQVAGFTQGYDKNLTFLTIKGAGHTVPEYKPREALDFYKRFLAGLPI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0069 499 Pfam Serine carboxypeptidase 37 495 IPR001563 GO:0004185|GO:0006508
Lal19g0069 499 Gene3D - 351 498 - -
Lal19g0069 499 SUPERFAMILY alpha/beta-Hydrolases 33 498 IPR029058 -
Lal19g0069 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 466 483 IPR033124 GO:0004185
Lal19g0069 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lal19g0069 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lal19g0069 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Lal19g0069 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Lal19g0069 499 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 19 496 - -
Lal19g0069 499 Gene3D alpha/beta hydrolase 25 323 IPR029058 -
Lal19g0069 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 496 IPR001563 GO:0004185|GO:0006508
Lal19g0069 499 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0069 Lal-Chr19 541223 546689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0069 360 499 Calmodulin-binding Proteins AT2G22960 44.286 1.56e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0069 K16296 - gmx:100792057 850.892