Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0068 ATGGAACAACCAGAAAGGCAATCTAGTTTCAGAAAATGTTCATCTGCTATCAAAACCAAAGTTGTCAGTAACTTAAGTCCAGTGTGTCATTCTGGCTTACAATTAACACTCAAGGGGAAGTTCTTGATAGCACATAATCATGGCAAATCAATACATGGAAAATTAGTTTCTGTTCAGATTTATAGTGGAACAGAAGTGGATCCTAATACAGGGAAAGGGAAGTTGAGCAAAAAAGCATATTTCAAAAATGGAGGAAGCAAGAAAAATCAGCATGATGCACAAACCATGACATATAAAATTAGTGTAGATGTTGACTCACATTTTGGCACTCCAAGAGCTTTTCTGATTCAAAACAATGATAAGAGATTCTTCCTTCTGTCTGCATCTGTTGAGACTTCTAACAGTCAGATAATTTACTATGACTGTAATTCTTGGATATATCCATTCAAGAAGACCAAATCTGATAGACTTTTCTTCTCAAATAGATGCTATCTTCCACTTCAAACACCAAGAGCACTAGTCGAACTAAGAAAAGAAGAGCTTGATCGATTGAGGGGTAATGGGACGGGAGAAAGAAAGGAATCGGATCGAATCTATGACTATGACTGCTACAATGACCTTAGTGATCCTGATAAAGGTCCAGAGCACCTTAGACCTATCCTTGGTGGGTCTAAGTTATATCCCTATCCGCGCAGAGGAAGAACAGGTCGTAAACCGAGTCTAGCAGGTCCTTCAACTGAAAGCCGGCCACAAGCACTTAATTTTGACATATATCTTCCATCAGATGAGAGATTTAGCCCGAATAAGTTGAAGGAGCTCAAAGCAAATTGTATCCATTCTATGATACAATTTTTATCACCAAAGGAAGAATCATTACTTCAGCAAAGTTCTAGAAGCTTTGATTCATTCGAAGAGATACTTGACATGTTCTCTAGCAATAGAAACCAAAAAATAGAGGGATGGATCAGAAACAACTTAAAGAAAATGATATCAGTTGAGCACTTAAAGGAAATAACTCGCGCAATGAAGAAAGACCCTCTGAAATTTGCTATCCCTCAAATCATATCAGAAAATGAATGGGCTTGGAAAGATGATATCGAGTTTGGACGACAAATGCTTGCAGGAATTCACCCTGTCAAAATCCAATGTTTGAAGAGCTTCCCACCTAAAAGCAAAATCAGAGTAGAGAGTTCGATAAATCCATTAATCATAGAACAGAAGCTTGAAGGATGGACACTTCCTCAGGCATTGGAACAGGGAAGAATATTCATGCTGGACCACCATGACTATATCATTCCATTTTTGAACAGAATGAACAAAAATGGAATCTGTGCCTATGCATCCAGGACAATACTATTCTTAAGGAGTGATGGTATGCTCAAGCCAATGGCGATAGAACTTAGTTTGCCAGGCTCGTCTTTAGGATATGAAGTCCCGAAAGTTTTTGTTCCAGCGAAACAAGGGACAGAAGCAGCGCTTTGGCAGCTCGCTAAAGCTCACGTCTTAGCTAATGATGCTGTTTACCATCAACTAATTAGCCATTGGTTACACACCCATGCAGTTATTGAACCATTTATCATAGCCACTAAAAGACGGTTGAGTGTTATGCATCCAATCCATAGGATCTTGAGTCCACATTTCAAAGACACCATGCACATAAATGCGTTAGCGCGACTTATCCTAATAAACTCAGGAGGAATTCTGGAGAGAATATTATTTTCTGGTGAGTTCTCTATGCAAATATCTTCTGAGCTCTATAAAGAGTGGAGATTTGATCAACAAGGTCTTCCTGCTGATCTAATCAAAAGGGGCATCGCTATAGAAGATCTAGATGTAAGCAACCCTACTGGGATTAAGCTTATCTTGCAGGACTATCCCTATGCCATTGATGGACTAGAAATATGGGTTGCCATCAAAAAGTGGGTGAAGAGCTTCTGCTCATTCTTCTACAAAGATGATGATGCCATGAAGGCTGATTTTGAACTCCAATGTTGGTGGTCCGAAATTCGAACTCATGGTCACAGTGACAAACAAAGTGAGACATGGTGGTATGAAATGACTACACTCTCAAACCTTGTAGAAGCATTAACAACACTCATATGGACTGCTTCTGCTCAACATGCATCTCTAAACTATGGCCAATACGATTACAATGGCCCTCCGAACCGTCCCACGTTGTGCAGAAAGTTTATTCCAAATGAAGGAACAACTGAGTTTGGTGAGTTCCTAAAGGACCCTGATAAGTTTTTACTGAACATGTTACCTGACAGGTTTGAGATGAGTCTTGCTGTGGCATTGGTAAATGTCCTCTCTCAGCACACTTGTGATGAAGTTTACTTGGGTTGTAAGTCATCGCCAGGGTGGATAGATAATGAATTGATTCAGAATATATTTGCAGAGTTCAGAGAAGAACTAAAAGAGATTCAGATAAGGATCTTAGAAAGAAACAGAGATCCTAAGCTTAAGAATCGACGAGGACCAGTAAATATTGAATACACTCTTCTGTACCCTGAGACATCGTCTAGTTCTGGATCAAGACATGAGAGCATGGGAAGAGGAATACCAAATAGCATCTCAATTTAA 2583 0.3949 MEQPERQSSFRKCSSAIKTKVVSNLSPVCHSGLQLTLKGKFLIAHNHGKSIHGKLVSVQIYSGTEVDPNTGKGKLSKKAYFKNGGSKKNQHDAQTMTYKISVDVDSHFGTPRAFLIQNNDKRFFLLSASVETSNSQIIYYDCNSWIYPFKKTKSDRLFFSNRCYLPLQTPRALVELRKEELDRLRGNGTGERKESDRIYDYDCYNDLSDPDKGPEHLRPILGGSKLYPYPRRGRTGRKPSLAGPSTESRPQALNFDIYLPSDERFSPNKLKELKANCIHSMIQFLSPKEESLLQQSSRSFDSFEEILDMFSSNRNQKIEGWIRNNLKKMISVEHLKEITRAMKKDPLKFAIPQIISENEWAWKDDIEFGRQMLAGIHPVKIQCLKSFPPKSKIRVESSINPLIIEQKLEGWTLPQALEQGRIFMLDHHDYIIPFLNRMNKNGICAYASRTILFLRSDGMLKPMAIELSLPGSSLGYEVPKVFVPAKQGTEAALWQLAKAHVLANDAVYHQLISHWLHTHAVIEPFIIATKRRLSVMHPIHRILSPHFKDTMHINALARLILINSGGILERILFSGEFSMQISSELYKEWRFDQQGLPADLIKRGIAIEDLDVSNPTGIKLILQDYPYAIDGLEIWVAIKKWVKSFCSFFYKDDDAMKADFELQCWWSEIRTHGHSDKQSETWWYEMTTLSNLVEALTTLIWTASAQHASLNYGQYDYNGPPNRPTLCRKFIPNEGTTEFGEFLKDPDKFLLNMLPDRFEMSLAVALVNVLSQHTCDEVYLGCKSSPGWIDNELIQNIFAEFREELKEIQIRILERNRDPKLKNRRGPVNIEYTLLYPETSSSSGSRHESMGRGIPNSISI 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0068 860 MobiDBLite consensus disorder prediction 214 248 - -
Lal19g0068 860 Pfam Lipoxygenase 173 837 IPR013819 GO:0016702|GO:0046872
Lal19g0068 860 PANTHER LIPOXYGENASE 88 858 - -
Lal19g0068 860 SMART LH2_4 29 161 IPR001024 GO:0005515
Lal19g0068 860 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 164 IPR036392 GO:0005515
Lal19g0068 860 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 163 860 IPR013819 GO:0016702|GO:0046872
Lal19g0068 860 Gene3D PLAT/LH2 domain 9 164 - -
Lal19g0068 860 SUPERFAMILY Lipoxigenase 165 860 IPR036226 -
Lal19g0068 860 MobiDBLite consensus disorder prediction 839 860 - -
Lal19g0068 860 PRINTS Plant lipoxygenase signature 130 148 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 156 177 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 195 211 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 228 247 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 297 318 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 347 363 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 446 470 IPR001246 GO:0016491
Lal19g0068 860 PRINTS Plant lipoxygenase signature 767 781 IPR001246 GO:0016491
Lal19g0068 860 Gene3D - 360 486 - -
Lal19g0068 860 PANTHER LIPOXYGENASE 88 858 IPR000907 GO:0016702|GO:0046872
Lal19g0068 860 ProSitePatterns Lipoxygenases iron-binding region signature 1. 509 523 IPR020833 GO:0016702|GO:0046872
Lal19g0068 860 Gene3D - 269 359 IPR027433 -
Lal19g0068 860 PRINTS Lipoxygenase signature 491 508 IPR013819 GO:0016702|GO:0046872
Lal19g0068 860 PRINTS Lipoxygenase signature 509 526 IPR013819 GO:0016702|GO:0046872
Lal19g0068 860 PRINTS Lipoxygenase signature 529 549 IPR013819 GO:0016702|GO:0046872
Lal19g0068 860 Gene3D - 165 267 - -
Lal19g0068 860 Gene3D - 487 859 - -
Lal19g0068 860 ProSitePatterns Lipoxygenases iron-binding region signature 2. 536 546 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0068 Lal-Chr19 535132 543535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0068 53 860 Acyl Lipid Metabolism Gene Families AT3G22400 46.433 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0068 K00454 - gmx:100797946 1365.9