Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0052 ATGGCACAAGTGAGGAACAAGCAAGTGGTTCTGAGGGATCATGTTACTGGTTTTCCTAAAGAATCTGACATGAACATTGTTGAAACTACCATTACTTTGAATCTTCCACAAGCTTCCAATGATGTGTTGCTCAAGAATCTGTATATCTCATGTGATCCATACATGAGAATACTCATGAACAAAGTTGATGTCTTTGAGGGATTACCAACCTATACTCCTGCCTCTCCCTTAACTGGGTTTGGTGTGGCTAAAGTAGTTGAATCAGGACACCCGGATTATAAGAAAGGCGATATCGTATCGAGTTTTACTAAGTGGGAAGAGTACAGTTTGGTTCCCTCAACTCAAATATTTTGCAAAATTGAGCACATTGATGTTCCACTTTCCTATTACACTGGAATTCTTGGTATGGCGGGACTGACTGCTTATGTAGGTTTGTTTGAATTTGGCACTCCCAAAAAAGGAGAGAATGTTTTTGTCTCAGCTGCCTCTGGTGCTGTTGGACAACTTGTTGGGCAATTTGCTAAATTGAGTGGTTGTTATGTAGTTGGAAGTGCTGGAAGTAAAGAAAAGGTAGATCTATTGAAGAATAAATTAGGATTTGATGAAGCTTTCAACTATAAAGAAGAGCTAGACCTCAATGCAGCTTTAAAAAGGTACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCTGTACTCTTGAATTTGAGAGTCAATGCGCGAATACCGGTTTGTGGAATGATCTCACAGTATAATCTTATTGAGCCTGAAGGTGTAACAAATTTGACAAACATCATATTTAAGCAAGTTCATATGCAAGGCTTTCTTGTTCCTAGTTACTATCACTTATATCCTAAATTCTTGGAGTATCTTTTGCCTCATATCAGAGAAGGGAAGGTTGTATATGTGGAAGATATAGCTGAGGGACTTGAGAATGGACCTAAAGCCTTAGTTGGCCTTTATAGCGGTCGCAATGTTGGTAAGCAAGTGATCGCGATTGCTCGCGAATAA 1032 0.3944 MAQVRNKQVVLRDHVTGFPKESDMNIVETTITLNLPQASNDVLLKNLYISCDPYMRILMNKVDVFEGLPTYTPASPLTGFGVAKVVESGHPDYKKGDIVSSFTKWEEYSLVPSTQIFCKIEHIDVPLSYYTGILGMAGLTAYVGLFEFGTPKKGENVFVSAASGAVGQLVGQFAKLSGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEELDLNAALKRYFPEGIDIYFENVGGKTLDAVLLNLRVNARIPVCGMISQYNLIEPEGVTNLTNIIFKQVHMQGFLVPSYYHLYPKFLEYLLPHIREGKVVYVEDIAEGLENGPKALVGLYSGRNVGKQVIAIARE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0052 343 SUPERFAMILY GroES-like 3 170 IPR011032 -
Lal19g0052 343 Pfam Zinc-binding dehydrogenase 165 296 IPR013149 -
Lal19g0052 343 SMART PKS_ER_names_mod 28 338 IPR020843 GO:0016491
Lal19g0052 343 Pfam N-terminal domain of oxidoreductase 7 116 IPR041694 -
Lal19g0052 343 Gene3D - 133 309 - -
Lal19g0052 343 CDD double_bond_reductase_like 4 340 - -
Lal19g0052 343 Gene3D - 8 338 - -
Lal19g0052 343 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 343 - -
Lal19g0052 343 PANTHER PROSTAGLANDIN REDUCTASE 1 343 IPR045010 GO:0016628
Lal19g0052 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 303 IPR036291 -
Lal19g0052 343 SUPERFAMILY GroES-like 286 338 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0052 Lal-Chr19 389159 391342 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0052 K19825 - gmx:100811802 568.54