Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0048 ATGGCTTCTAGGCCAGGAATTCTCACTGATTGGCCATGGAAGCCTCTTGGAAACTTTAAGTACTTGATATTGAGTCCATGGATTGTTCATAGCACATATTCAGTGTTTGTGAAGGATAAGAATGAAAGAGATATATCAACTTCTCTCATATTTCCATTTTTGCTGTTTCGAATGCTTCACAATCAAATATGGATCAGTTTCTCTCGTTATAGAACTGCAAAAGGCACTACTAGAATTGTTGATAAAGGGATTGAATTTGATCAAGTTGATAGAGAAAGAAACTGGGATGATCAAATATTGTTCAATGGATTACTATACTACTTAGCAAGCTATAGCTTAAGTGGGGCATCACGTCTTCCATTATGGAGAACAGATGGAGTGATAATGGCAATAGTCCTTCATGCTGGACCTGTTGAGTTCCTTTACTATTGGTTACATAGAGCTCTTCATCATCACTATCTCTATTCTAGATACCATTCTCATCACCATTCTTCTATTGTCACTGAACCCATTACTTCTGTTATACATCCATTTGCAGAACACATATCATACTTCCTTCTGTTTGCAATACCACTTTTAACCCTTGTTTTCACACAAAGAGCCTCTCTCATTGCCATGGTTGGATATGTCATTTACATTGATTTTATGAACAATTTGGGTCATTGCAATTTTGAGATCATTCCTAAATGGCTCTTCAAATTCTTCCCCCCTCTCAAGTATCTCATGTATACACCATCGTTCCACTCATTGCACCATACACAGTTTAGGACAAATTATTCCTTATTTATGCCATTATATGATTACATATATGGAACCATGGATAAGGGTTCAAATGAATTACATGAATCTGCATTAAAAAGAGAAGAAGACACAGCACATGTTATTCACTTAACACATCTTACTACTCCTCAATCCATTTATCATCTCAGACTTGGATTTCCTTCATTAGCTTCTAAACCTTACATGCAAAAATGGTATATTTCTTTAATGTGGCCTATCACTGCATGCTCCATCATCCTCACATGGCTCTATGGTCGCACATTCATTCTGGAGAGGAACACTTTTCATAAACTCAAACTTCAGACTTGGGCAATACCTAAATACACTTTCCAATACTTTCTGGAATGGCAAAAAGGACCTATCAACAGAATAATTGAGGAAGCAATAATGGATGCTGACAGAAAAGGCATAAAAGTAGTGAGCCTAGGCCTCATGAATGAAGATGAAGAGCTTAACATGAATGGAGGATTATATGTTACTAAGAATCCAAACCTCAAAGTTAAGGTTGTAGATGGAAGCAGTCTTGCAGTTGCTGTTGTTCTTAACACTATTCCTAAAGGAAAAACTCAAGTGTTACTTAGGGGCAAACTCACCAAGGTTGCTTATGCTGTTGCCTATACTTTGTGCCACCAAGGTGTTCAGGTTGCTACAATGTATGAAGATGATTATGTGAAGCTCAAAAAGTCATTCAATGGCTCAGAAACTAATTTGATCATCACTAAAAGTTTCACTCAAACGACATGGTTAGTTGGAGAAGATTTGAGTAAAGAGGAACAAATGAAGGCACCAAAAGGAACATTATTTATTCCATACTCACAATTCCCACCAAAGAAATACAGAAAAGACTGTTCCTTCCATTGCACTCCAGCAATGCTAACTCCAACTTCTCTTGAAAATCTTCATTCTTGTGAGGGTTGGTTGCCAAGGAGGGTGATGAGTGCATGGCGCATAGCTGGGATAGTGCACTGTTTAGAAGGATGGAATGAAAATGAGTGTGGCTACAAAATGCATAACATTGACAAAGTTTGGAACACAACACTTCAACATGGGTTTCTACCTGTCCCTGTTTCTGTCCCATTTCATCCAAAGAATTAG 1875 0.3765 MASRPGILTDWPWKPLGNFKYLILSPWIVHSTYSVFVKDKNERDISTSLIFPFLLFRMLHNQIWISFSRYRTAKGTTRIVDKGIEFDQVDRERNWDDQILFNGLLYYLASYSLSGASRLPLWRTDGVIMAIVLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPLLTLVFTQRASLIAMVGYVIYIDFMNNLGHCNFEIIPKWLFKFFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTMDKGSNELHESALKREEDTAHVIHLTHLTTPQSIYHLRLGFPSLASKPYMQKWYISLMWPITACSIILTWLYGRTFILERNTFHKLKLQTWAIPKYTFQYFLEWQKGPINRIIEEAIMDADRKGIKVVSLGLMNEDEELNMNGGLYVTKNPNLKVKVVDGSSLAVAVVLNTIPKGKTQVLLRGKLTKVAYAVAYTLCHQGVQVATMYEDDYVKLKKSFNGSETNLIITKSFTQTTWLVGEDLSKEEQMKAPKGTLFIPYSQFPPKKYRKDCSFHCTPAMLTPTSLENLHSCEGWLPRRVMSAWRIAGIVHCLEGWNENECGYKMHNIDKVWNTTLQHGFLPVPVSVPFHPKN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0048 624 PANTHER STEROL DESATURASE 1 616 - -
Lal19g0048 624 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 616 - -
Lal19g0048 624 Pfam Fatty acid hydroxylase 135 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lal19g0048 624 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0048 Lal-Chr19 362001 372929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0048 1 617 Lipid Metabolism Gene Families AT1G02190 57.735 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0048 K15404 - gmx:100818020 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0048 19 362001 372929 Lal19g0048 19 362001 372929 ECH