Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0034 ATGTATGGTGGAGATGAGGTATCAGCAATGGTACTTGACTTGGGTTCACACACATGCAAAGCTGGTTATGCTGGTGAAGATGCTCCTAAGGCTGTTTTTCCTTCTGTTGCTGGAGCAATTGACCAAATGGATATTGATGAATCAGATAATTCTGAAAAGAACTCTGTTTCTGTTGACAAAGCCAAGGGAAAGAGGAAATTGTATGTAGGATCTCAGTCCTTGGGATACCGTAGAGACCATATGGAGGTGTTGTCTCCATTTAAGGATGGAATTGTTGCTGACTGGGATATTGTTGACAGCATATGGGATCATGCCTTCAGGGAGTGCCTATCGATTGATCCTAAAGAGCATCCAATGCTTCTTGCAGAACCTTCTTCCAACACTCAACAACAGAGGGAAAGGGCTGCTGAGCTTATGTTTGAGAAGTACAAAGCACCTGCATTGTTTTTGGCGAAGAATGCTGTTTTGACTTCTTTTGCATCAGGTCGTGCTACGTCATTGGTTGTTGATAGTGGTGGAGGATCAACTACAGTTGTTCCAGTACATGATGGTTATGTTCTTCAGAAGGCTGTGGCAACCTCTCCAATTGGAGGTGAATTGCTTACAGACTGCTTGATAAAAAGCTTGGAAAGCAAGGGTATCGTGATAAAACCACGGTATTCTTTTAGGAGAAAGGAAATACGTCCTGGAGAGTTTCAGACTGTTGATCTTGATTTTCCAAATACAAGTGAAAGCTACAAACTATACTCCCAGAGAGTGATTGCTAGTGATATCAAGGAATGTGTGTGTCGGGCTCCAGATGCTTCATATGATGAGAGTGCATATTCAAACATTCCAACAACCCCGTATGAACTTCCTGATGGCCAGATAATTGAAATTGGTGCTGATAGATTTAAGATTCCAGATATTCTTTTTAATCCATCCCTGGTTCAGACAATTCCTGGCATGGAGAGTTTTGCAGAAATTGCTCCTTCAGTTCGTGGCCTGCCTCAAATGGTTATAGAGAGCATTAATAAGTGTGATGTAGACATCCGTAGAGAATTATTCAGTAGCATACTGCTTGCTGGTGGTACAGCTTCAATGCAACAATTAAAGGAACGCCTCGAGAAAGATTTGCTAGAGGATTCCCCACAAGCTGCTAGAGTAAAAGTACTGGCCAGTGGAAATGCAACTGAAAGAAGGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAATGTCCTTGA 1227 0.4214 MYGGDEVSAMVLDLGSHTCKAGYAGEDAPKAVFPSVAGAIDQMDIDESDNSEKNSVSVDKAKGKRKLYVGSQSLGYRRDHMEVLSPFKDGIVADWDIVDSIWDHAFRECLSIDPKEHPMLLAEPSSNTQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVVPVHDGYVLQKAVATSPIGGELLTDCLIKSLESKGIVIKPRYSFRRKEIRPGEFQTVDLDFPNTSESYKLYSQRVIASDIKECVCRAPDASYDESAYSNIPTTPYELPDGQIIEIGADRFKIPDILFNPSLVQTIPGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEDSPQAARVKVLASGNATERRYEEHGASYIQRKCP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0034 408 SUPERFAMILY Actin-like ATPase domain 163 407 IPR043129 -
Lal19g0034 408 CDD NBD_sugar-kinase_HSP70_actin 10 192 - -
Lal19g0034 408 PRINTS Actin signature 28 37 IPR004000 -
Lal19g0034 408 PRINTS Actin signature 131 144 IPR004000 -
Lal19g0034 408 PRINTS Actin signature 156 175 IPR004000 -
Lal19g0034 408 PANTHER - 2 396 - -
Lal19g0034 408 SMART actin_3 7 408 IPR004000 -
Lal19g0034 408 Gene3D - 3 408 - -
Lal19g0034 408 PANTHER ACTIN 2 396 IPR004000 -
Lal19g0034 408 Gene3D - 168 372 - -
Lal19g0034 408 SUPERFAMILY Actin-like ATPase domain 5 169 IPR043129 -
Lal19g0034 408 Pfam Actin 4 396 IPR004000 -
Lal19g0034 408 Gene3D Actin; Chain A, domain 4 198 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0034 Lal-Chr19 269878 280464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0034 1 407 Miscellaneous Gene Families AT3G53750 32.639 2.66e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0034 K11340 - gmx:100785066 724.161