Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1628 ATGGCTAAATCTCATGTAGAAGTTGTGCCTTCACCAACCAAGGATGATGAAGACTCAGAGAAAGGTATTATTGAACAACATTGTGTCATATATGTCTATCATACCAAAGTGGCAGAGTCAAATCGTAGTATAATAGTGAAATGGTGTAAGAGTACCATGGAACATACCCTTTCCATGTGTGTGGAAAAAAACCCATCTGAAGAAAACAACTATACTTGCAAGATTGATTTAGAATGTGGACAATCTTGGGGGAAAAAGGGTCTCAAATCTTTTGAAATAGATGGCACACGAGTAGATGTTTTTTGGGATTTTAGAGAAGCAATTTTCTCGATGGGTCCACAACCTAGTTCATGTTATTATGTTGCCTTGGTGTACAAGAAAGAGGTACTATTGTTACTAGGAGATTTAGCAAATGAAGCTTATAGGAGAACCAAATCAAAACCTTCTTTGGAAGAGGTTACCTTGTTGAGCAAGAAAGAGAATGTGTATGGAAAGAATGTATTTTGTACTAGAGCAATGTTGGAAGAGGGTAAAAATGAACATGAAATTGTTATAGAGACTTCACTTTGTGGGCCTCATGATCCAGAAATGTGGATATGTATAGATGGAATGCTAACAAGTAGAATAATGAACTTGAATTGGAGATTCAGAGGGAATGAAGTAGTGATGGTGAATAATTTGCCAGTGCAAATATTTTGGGATGTGCATGATTGGTTGTTCAATGACAATAGTTCTGGCCCTGGTTTGTTCATTTTCAAGCCAGGCTTTTTTGAACCTACTAATTATCCTAATATCAGAGAATGCCCACAAAAAAGGGAAGAAGATAACAACAACAGAGATGAGTTATTAGAGGAGTGTCCATTTACCACAGATATTGAACAAATGGAAGAGGCTGCAGAGACTGTTGAAGAGGTTCCAATCGACCAGACCGGAGACTCTTCTGAAAAGGATTTAGTCCACATTGACAGATTTACCAATAATGTTGAGGAATCAGCTATTAAATTACTTGCAGCTAGAGCACTCACAGCAGTCGAGTTGAGAAAGAAATTGCTTGGGAAGAGATTCTCTCCTAATGCAGTGGAGGCAGTTATAAAGAAGTTTCTCAATAGAGGGTTGATCAATGATAGGTTGTATGCTGAATCATATTCTCAATCTAGATGGTCTTCGTCAACTTGGGGGCCGAGGCGGATCAAACAAGCACTGTTCAAGAAAGGAGTTAGTAAAGGTGATGCTGATAATGCAGTTGATGTGGTATTCAAGGATAACGATGAGTGTGCTGAAGAACATAATTCAGTTATTGGACTGTCAAAGCATTCAATTGATCATCTTTATGCTCAGGCCACAAAGCAGTGGTTCCGCGGCCAGAATGTACCCAAGGAGACAAGAAAAGCAAGGATTGTTAGGTGGCTTCAATATCGTGGTTTTGACTGGAAAGTCACTAGCTTCATCTTGAAGAAATTAGAAAGGCAGGAGCATGAGCGTGAGCGTGAGCATGATCCACCATAG 1506 0.3918 MAKSHVEVVPSPTKDDEDSEKGIIEQHCVIYVYHTKVAESNRSIIVKWCKSTMEHTLSMCVEKNPSEENNYTCKIDLECGQSWGKKGLKSFEIDGTRVDVFWDFREAIFSMGPQPSSCYYVALVYKKEVLLLLGDLANEAYRRTKSKPSLEEVTLLSKKENVYGKNVFCTRAMLEEGKNEHEIVIETSLCGPHDPEMWICIDGMLTSRIMNLNWRFRGNEVVMVNNLPVQIFWDVHDWLFNDNSSGPGLFIFKPGFFEPTNYPNIRECPQKREEDNNNRDELLEECPFTTDIEQMEEAAETVEEVPIDQTGDSSEKDLVHIDRFTNNVEESAIKLLAARALTAVELRKKLLGKRFSPNAVEAVIKKFLNRGLINDRLYAESYSQSRWSSSTWGPRRIKQALFKKGVSKGDADNAVDVVFKDNDECAEEHNSVIGLSKHSIDHLYAQATKQWFRGQNVPKETRKARIVRWLQYRGFDWKVTSFILKKLERQEHEREREHDPP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1628 501 Gene3D - 374 416 IPR036388 -
Lal18g1628 501 Gene3D - 437 499 IPR036388 -
Lal18g1628 501 Hamap Regulatory protein RecX [recX]. 311 491 IPR003783 GO:0006282
Lal18g1628 501 Gene3D - 328 372 IPR036388 -
Lal18g1628 501 PANTHER KINESIN-LIKE PROTEIN (DUF868) 23 281 - -
Lal18g1628 501 Pfam RecX family 353 488 IPR003783 GO:0006282
Lal18g1628 501 Pfam Plant protein of unknown function (DUF868) 26 270 IPR008586 -
Lal18g1628 501 PANTHER EXPRESSED PROTEIN 23 281 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1628 Lal-Chr18 17673785 17681292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1628 26 253 EF-hand Containing Proteins AT5G28150 34.649 3.42e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1628 - - gsj:114377104 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1628 18 17673785 17681292 Lal18g1628 18 17673785 17681292 ECH
Lal18g1628 18 17673785 17681292 Lal22g0040 22 248580 249637 LSH