Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1622 ATGGATGGGGTTATCCCGGATGTGCCTGAACACAAACATCATTCCAATTTCCCTGTAACTGATGAGATTGATGATTCTCCTATTGAGCAAGTGAGGCTTACAGTTCCAATCACAGATGACCCAACACAACCAGCACTGACATTCAGGACATGGTTTCTTGGGCTTGCATCATGTCTTCTACTTTCCTTTGTGAACCAATTTTTTAGCTTTAGAACCAACCCTCTATACCTTTCTTCAGTGTCAGCCCAGATTGTTACCCTCCCACTTGGGAAACTAATGGCTGCAACACTTCCAACAAGGAGGTTCCAAGTCCCATTAACCAAATGGTATTTTACCTTAAATCCAGGGCCTTTCTCTTTGAAAGAACATGCCCTTATCACAATCTTTGCCAGTTCTGGATCTAGTGGTGTTTATGCCATCAATATCATCACAATTGTTAAGGTTTTCTATCATAGGGGCATTCATCCTGCTGCTGCTTTTATGTTAGCAATCTCAACCCAGATGCTTGGGTATGGATGGGCTGGGATTTTCAGGAAATTTCTTGTTGACTCTCCATACATGTGGTGGCCTTCAAATCTGGTGCAAGTGTCTCTATTCAGGGCATTTCATGAAAAAGAAAGAAGGCCTAAAGGAGGAAATACAAGGCTGCAATTCTTTTTCCTGGTCTTTGTATCAAGCTTTGCCTATTACATCATTCCAGGCTACTTCTTCCAAGCATTAACTTCTATCTCCTTTGTATGTTTGATTTGGAAAAAATCAATCACTGCACATCAGATTGGTTCAGGAATGTATGGCCTTGGCATTGGCTCATTTAGTCTTGACTGGAACACTGTTTCTGGCTTCTTAGGCAGTCCTTTGGCTGTACCTGGCTTTGCTATCATCAACACACTAGTTGGATTTGCGCTACTTATCTATGTTGTGATTCCCCTTTGCTATTGGAACAATATATATTATGCAAAAAAGTTTCCCCTCGTTAGTGCTCGTACATTTGACTCTACTGGTGCAAGATATAATGTTACAAGGATTTTGAATACAAAAACTTTTGACATTGATATAGATAGCTATAACAATTACAGCAAACTCCATCTTAGTATCATATTTGCATTAGAGTATGGATTGAGCTTTGCAACTCTAACCGCAACTCTTTCACATGTTGCCCTCTTCCATGGAAAAACAATTTGGCAGTTGTGGAAGAAGACAACTAGTGCAGTAAAAGGACAACTTGGAGATGTGCATACAAGAATTATGAAGAGAAACTATGAACAAGTCCCTGAATGGTGGTATGTAACAATATTGGCTCTAATGATTATTATGTCATTGGTAGCTTGTGAAGGCTTTGGCAAGCAACTTCAACTTCCATGGTGGGGATTCTTACTTTCTCTAGGAATTGCATTAGTTTTCACCTTGCCAGTTGGGGTTATTCAAGCAACAACAAACATGCAAACAGGACTCAATGTGATAACAGAGTTGATAATTGGATACATATATCCTGGAAGGCCCCTTGCTAATGTAGCATTCAAGACTTACGGCTACATCAGCATGTCACAAGCACTTGGATTTCTTGGTGACTTTAAATTAGGCCACTACATGAAAATTCCTCCAAAATCTATGTTCATTGCTCAGTTGGTGGGCACAATAGTTGCTTCAAGTATGTACTTTGGCACAGCATGGTGGCTTCTAACATCTATTGAGAACATTTGTGACGAAACACTGTTGCCAGAGGGGAGTCCATGGACATGTCCTAGTGATGTGGTGTTTTATAATGCTTCGATTATATGGGGAGTAGTAGGGCCACAAAGAATGTTTACTAAGGATGGTGTTTACCCTGAGTTGAATTTGTTCTTCCTCATTGGCCTACTTGCACCACTTCCAGTATGGTTACTTGCACGCAAATTCCCTACCCATAAGTGGATTGAATTGATCAACATGCCAATTATCTTTGGAGGTGCTGGTGGCATCCCTCCAGCAAGAGCAGTGAATTATATCATGTGGGGAGTTGTTGGAATCTTCTTCAATTTCTATGTGTATAGAAAGTTCAAGGCATGGTGGGCTAGACATACTTATATCCTCTCAGCTGGTTTAGATGCTGGTATAGCTTTCACTGGAGTTTTGCTCTATTTTGTACTCCAAAACTATAATGTCTATGGTCCTAAATGGTGGGGTCTTGAAGGAGATGATCACTGCCCATTAGCCAGATGCCCTACAGCTCCTGGGGTACTTGCCCCTGGATGCCCACTTCTCTAA 2244 0.4104 MDGVIPDVPEHKHHSNFPVTDEIDDSPIEQVRLTVPITDDPTQPALTFRTWFLGLASCLLLSFVNQFFSFRTNPLYLSSVSAQIVTLPLGKLMAATLPTRRFQVPLTKWYFTLNPGPFSLKEHALITIFASSGSSGVYAINIITIVKVFYHRGIHPAAAFMLAISTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKERRPKGGNTRLQFFFLVFVSSFAYYIIPGYFFQALTSISFVCLIWKKSITAHQIGSGMYGLGIGSFSLDWNTVSGFLGSPLAVPGFAIINTLVGFALLIYVVIPLCYWNNIYYAKKFPLVSARTFDSTGARYNVTRILNTKTFDIDIDSYNNYSKLHLSIIFALEYGLSFATLTATLSHVALFHGKTIWQLWKKTTSAVKGQLGDVHTRIMKRNYEQVPEWWYVTILALMIIMSLVACEGFGKQLQLPWWGFLLSLGIALVFTLPVGVIQATTNMQTGLNVITELIIGYIYPGRPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFIAQLVGTIVASSMYFGTAWWLLTSIENICDETLLPEGSPWTCPSDVVFYNASIIWGVVGPQRMFTKDGVYPELNLFFLIGLLAPLPVWLLARKFPTHKWIELINMPIIFGGAGGIPPARAVNYIMWGVVGIFFNFYVYRKFKAWWARHTYILSAGLDAGIAFTGVLLYFVLQNYNVYGPKWWGLEGDDHCPLARCPTAPGVLAPGCPLL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1622 747 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 24 713 IPR004648 GO:0055085
Lal18g1622 747 Pfam OPT oligopeptide transporter protein 46 708 IPR004813 GO:0035673
Lal18g1622 747 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 30 710 IPR004813 GO:0035673
Lal18g1622 747 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 22 746 - -
Lal18g1622 747 PANTHER ISP4 LIKE PROTEIN 22 746 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1622 Lal-Chr18 17630569 17634922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1622 9 747 Organic Solute Cotransporters AT4G26590 65.276 0.0 1042
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1622 - - gmx:100776230 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1622 18 17630569 17634922 Lal18g1622 18 17630569 17634922 ECH
Lal18g1622 18 17630569 17634922 Lal6g0031 6 227878 232475 LSH