Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1618 ATGAAGAAGAGTGGTGAATATTTTTCATTGTTTGAGACAAGTAGAGGCAGAGGATGGTTTATCCACAGAGTATTTTCAATCTCAATGTTTGTGGCCATATGCTTCATATGGTTTTTCAGATTGAGCCATATAAAGGGTCATCAACAATATCAAAATCCATATTGGGCATGCCTTGCTTTGTTTGGTGCAGAAATATGGTTCACTTTCAGTTGGCTCTTCAGTCAAGCCCTCAGATGGAACCTTGTCTTCAGGAAAAACTTCAAAACTAGGCTCTCTCAAAGATATGAAGAGAAGAGTTTGCCAAAAGTGGACATATTTGTGTGTACGGCAGACCCAGATATTGAACCACCAATTATGGTGATAAATACAGTGTTATCTGTTATGTCTTATGACTATCCACCAGACAAAATTAGTGTGTATCTCTCTGATGATGCTGCTTCTGATATCACTTTCTATGCTCTTTTAGAAGCTTCTACTTTTGCTAAGCATTGGTTACCATTTTGCAAGAAATTCAAGGTGGAACCTACTTCACCTGCTGCTTATTTTAATACCCTTCATCACTCAACAACTTCTTCACTACACCCTAATCATGCAAAACACTTGGAACTCATCAAGAAGTTATACGAGGATATGAAAAGAAGAATTGAAGATGCAGCCAAGTTGGGGGGAGTGCCCAAGGAAATACGTTCAAACAATCACAGATTTTCTGAATGGGATTCATATTCTTCTCGACGTGACCATGACACAATTCTTCAAATACTACTTCATAAAAACGACAAGCATAATTCTAAAGATGTAGATGGATTTGTTATGCCAACACTAGTGTATTTGGCTCGTGAGAAGAGACCTCAATATCACCACAATTTCAAAGCCGGTGCCATGAATGCTTTGATAAGGGTATCCTCAAATATTAGCAACGCAAAAGTGATTCTAAATGTAGATTGTGACATGTACTCAAACAATTCACAATCAGTGAGAGATATTCTTTGTTTTTTCATGGATGATGAGAGAGGCCATGAAATTGCTTATGTGCAGTATCCACAGAGTTTTGAAAATCTCACCAAGAATGATTTATACGGGAATGCTCTATTAATACCTAGTGAGGTGGAGCTCCATGGTGCAGATGGTTATGGTGGCCCATTGTATATTGGAACTTGCTGCTTTCATAGAAGAGATGCTCTATGTGGGAAGAAGTATGATGGTGGATATAGGAATGATTGGAAGAGTGACAATGACCATGCCATAGAATCAAATTTGCATGAACTAGAAGAAAAATCTAAAGCTTTAGCAAGCTGCACTTATGAAGAAAACACTCAATGGGGGAAAAAGATGGGTTTAAGATATGGGTGTCTAGTAGAAGATGTGATAACAGGATTTGCAGTACAATCAGAAGGATGGAAATCCTTGTACTACAACCCAATGAGAAAAGGTTTCTTAGGTGTTGCTCCAACCACTTTGCTTCAAATACTTGTTCAACATAAGAGGTGGTCTGAAGGGCATCTTCAAATTTTGTTTTCTAACTACAGTCCCTTGTGGCATGCTCCTGGAATCATCAATATGGGTCTAAGAATGTGTTATTTGCACTGTAACATGTGGGCAACTACCTCTTTGCCAATACTATGTTACTCCATTATCCCTTCACTATATCTCCTCAAAGCCATTCCCTTGTTCCCAAAGATAAGTAGCCCTTGGTTCATACCATTTGCATATGTAATAGTTGGGGAGAGTATTTACTGTTTGTTAGAGTTTCTGATATTTGGAGGCACAATCAAAGGTTGGTGGAATGACCTAAGGATGTGGTTGTATAAAGGAACAAGCTCTTATCTATTTGCTTGCATAGACAACATCTTCAAATTCTTTGGGCTATCAGATTCACCTTTTACAATCACAACTAAGATAATGGATGAAGATATTTCCCAACGTTATGAGAATGAAGTTATGGAGTTTGGAGCATCTTCTCCATTCTTCACTATATTAGCAACACTTGCATTGTTCAATTTGTTATGCTTACTTTCCACTTTAAAGGACTTGGTGTTTAGTGAAGATGGTGTTAGAGCTTATGAGGAAATGGTGTTGCAGATTCTGTTGTGTGGTTTTCTAGTATTCATCAATTTTCCAATATACCAAGGACTTTTCTTAAGGAAGGACAAGGGCAAATTGCCAACTTCTGTTGTTATTAAATCAATAGTATTGGCTCTTAGTGCATGTATCCTCTTCAAAATTTTCATATGA 2232 0.3768 MKKSGEYFSLFETSRGRGWFIHRVFSISMFVAICFIWFFRLSHIKGHQQYQNPYWACLALFGAEIWFTFSWLFSQALRWNLVFRKNFKTRLSQRYEEKSLPKVDIFVCTADPDIEPPIMVINTVLSVMSYDYPPDKISVYLSDDAASDITFYALLEASTFAKHWLPFCKKFKVEPTSPAAYFNTLHHSTTSSLHPNHAKHLELIKKLYEDMKRRIEDAAKLGGVPKEIRSNNHRFSEWDSYSSRRDHDTILQILLHKNDKHNSKDVDGFVMPTLVYLAREKRPQYHHNFKAGAMNALIRVSSNISNAKVILNVDCDMYSNNSQSVRDILCFFMDDERGHEIAYVQYPQSFENLTKNDLYGNALLIPSEVELHGADGYGGPLYIGTCCFHRRDALCGKKYDGGYRNDWKSDNDHAIESNLHELEEKSKALASCTYEENTQWGKKMGLRYGCLVEDVITGFAVQSEGWKSLYYNPMRKGFLGVAPTTLLQILVQHKRWSEGHLQILFSNYSPLWHAPGIINMGLRMCYLHCNMWATTSLPILCYSIIPSLYLLKAIPLFPKISSPWFIPFAYVIVGESIYCLLEFLIFGGTIKGWWNDLRMWLYKGTSSYLFACIDNIFKFFGLSDSPFTITTKIMDEDISQRYENEVMEFGASSPFFTILATLALFNLLCLLSTLKDLVFSEDGVRAYEEMVLQILLCGFLVFINFPIYQGLFLRKDKGKLPTSVVIKSIVLALSACILFKIFI 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1618 743 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 188 IPR029044 -
Lal18g1618 743 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 243 478 IPR029044 -
Lal18g1618 743 Coils Coil 201 221 - -
Lal18g1618 743 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 6 740 - -
Lal18g1618 743 Pfam Cellulose synthase 427 739 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal18g1618 743 Pfam Cellulose synthase 103 397 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal18g1618 743 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 740 - -
Lal18g1618 743 SUPERFAMILY Nucleotide-diphospho-sugar transferases 113 557 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1618 Lal-Chr18 17603187 17608220 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1618 10 736 Glycosyltransferase AT1G55850 53.425 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1618 - - gmx:112999362 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1618 18 17603187 17608220 Lal18g1618 18 17603187 17608220 ECH
Lal18g1618 18 17603187 17608220 Lal18g1618 18 17603187 17608220 PCT