Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1617 ATGGGTGAGGAGGAATCAGCGAATGTTGTTACCAATACTGGCTCAAATGGCAATAACTTGCCAGGGAAAACTTTAAATGACATGATTGAGAAGAAGGACTTGGAAGCTGATCAAGAAAAAGCCTTAGGGGATAATGGAGTTAAAGACTTGAAAGTGGATGGCGTAAAAGAAATGGAAGAGGATAAGAAAGCTGGTGGTGAATTAAAAGACAATAATAAAGTTGGTGGTGGGGAGGAAGTGAAAGAGGACAAGGAAGTTTATTCTGTGGAAGGAAAGGAAGAGGGTAAGAAAGATGATAATGCATCTGGGAATGTAAAGCTGAACGAAGGAATTGAAGTTAAGGAAACTGTGGGTAGTAAAGAAGAAAAAGAAAATGTAGAAGCTAAGAAACCTGAATTGGATGTGATGGAAGCAATGGTTGTCTGTAAAGGTAAAGATGAAAGTAGTGAAAAGGAGAAAATCCAAGAGGCAGAGAAGGACGAGGATAAGGTTGATAAGCCAAAAGAAGAGAAGGTAGAAGATAGTAATATTGATAAAGGATTGAAAAGGTTTGGGAAAGGAAAGAACACCAGGGGGAAGGCGAAAAGTAAAGGAAATGAAACTGTGGATAGTAAAGGAGAAAAGGAAAATGTAGAAGCCAAGAAACCAGATGTGGGTTCAATGGAAGAAGCTTCCGTCCCAGAAGACAAAGATGAGAGCAGTGAAAAGAAGAAAATTCAAGAAGAGAAGGAGGAGGATAAGGTTAATAAGTCAAAAGAAGAAGAAAATGTAGATGATAGTAAGGTTGAGAAAGGATCGAGAAAGCACGGGAAAGGGAAGATCAACGGAGAGAAGGTGAAAAGGAAAGGAAAGGAAACTGTGGATAGTGAAAAGGAAAAGGAAAGTGTAGAAGCTAAGAAACCAGAATTGGATGCTGTGGAAGAAGAGGGCGTATCTGAAGACAAAAATGAGAGCAGTCAAAAGGAGAAAATTCAAGAAGAGGAGAAGGAGGACACGGAGAAAGGATCAAAAAAGCGTGGGAACAGGAAGATTAATGAGGAGAAGGTGGAGAAAAAAAGAAAGGTACTCAAGGAGACTGAGCCAAGGACTCCTGCTATCGTTCGCCCTATGCGTGAGAGGAAAACAGTGGAGAGGTTGGTTGCATCAATTGAAAAAGATGCAAACAAAGAACTTCACATCGCAAAGGGCAATGGCACTCCTTTAAAAGATATACCCAATGAAGTCAGAACAGCTAATAACTTTATGTCTTCTCATTTTTTCGCTTCAGTGGCATTTAAATTAGCTAGAAGGAAGATAGATGATACTTTGAAATTGCTCCATACAATTCTCTTTGGGAGGAGAGGGAAGGCAATTCAGGTCAAGAGTAATATATCAAGATTTTCTGGATTTGTGTGGCATGAAAATGAGGAAAAGCAAATGATTAAAGTGAAAGAAAAACTGGACAGGTGCAATAAAGAGAAGTTATTGGAATTCTGTGATTTGCTTGACATACAAGTTGCCAGGTCAACGATTAGGAAGGAAGATATTATTGCAAAGCTGGTAGAGTTTTTGGTTGCCCCTCAAGCGACAAGAACTGATCTTCTTGCTGAAAAGGAGAAGTTAATTAAGGGCAAAAAGCGCAAGAGCACAGCAAAACGATCGTCAAGGTCTGGAAAAACATCATCAGGACGTGCTGCTAAGAGTCAGAAGAAAATTGAAGGTTCTTCGGTAGCTGAGGAGATAAAAAGTACAACCGACACAGAAAATGAGTCAGAGGTAGAAGGGAAAGATGAAGAACCAGAGAAAAATGACAATGATGTTCCTGACAAGTCTGAGGATGAAGTACCAGAGAAATCTAAAAGTGAGGAAAAAGGTGATTCTGATAATGAATCTCAAGATGTGAAGAATGAATCTGCTGCAAAAAGTAAAATACCAGAAAATACAGTCACAACAAAGCCTCGCTCAGTATCAAAGAGAACTTCTAAAAAATCATCTGCTACCCGCTCAGAGTTAGATGATGACAGTGATGCAAGTCCAAAGGTCTCTTCAAGGAAGAAAAAAATTGAAAAAGGAGGAAAGCAGAAGGTCTCAGCTCCAAAGAAATCTTCCTCCAAAGAGAAAACAGAAAAGGTTACTAAAGGAAAGGGCAAGAGCAAGGAAAAGGTGGACCCTAGTGATGATCAGTTACGTGATGCAACATTGAAAATTCTTAAGGATGTTGACTTTAATACAGCTACATTTACTGACATTCTGAAGCAACTTGCTAAGCAATTTGATGCGGATCTGACTCCAAGAAAAGCCTCTATAAAGATCATTATTCAGGAAGAGCTGACGAAACTAGCTGAAGAAGCAGAAGATGAAGAGGATGAGGATGCTGAGAATGCTGAGGATTAG 2373 0.3953 MGEEESANVVTNTGSNGNNLPGKTLNDMIEKKDLEADQEKALGDNGVKDLKVDGVKEMEEDKKAGGELKDNNKVGGGEEVKEDKEVYSVEGKEEGKKDDNASGNVKLNEGIEVKETVGSKEEKENVEAKKPELDVMEAMVVCKGKDESSEKEKIQEAEKDEDKVDKPKEEKVEDSNIDKGLKRFGKGKNTRGKAKSKGNETVDSKGEKENVEAKKPDVGSMEEASVPEDKDESSEKKKIQEEKEEDKVNKSKEEENVDDSKVEKGSRKHGKGKINGEKVKRKGKETVDSEKEKESVEAKKPELDAVEEEGVSEDKNESSQKEKIQEEEKEDTEKGSKKRGNRKINEEKVEKKRKVLKETEPRTPAIVRPMRERKTVERLVASIEKDANKELHIAKGNGTPLKDIPNEVRTANNFMSSHFFASVAFKLARRKIDDTLKLLHTILFGRRGKAIQVKSNISRFSGFVWHENEEKQMIKVKEKLDRCNKEKLLEFCDLLDIQVARSTIRKEDIIAKLVEFLVAPQATRTDLLAEKEKLIKGKKRKSTAKRSSRSGKTSSGRAAKSQKKIEGSSVAEEIKSTTDTENESEVEGKDEEPEKNDNDVPDKSEDEVPEKSKSEEKGDSDNESQDVKNESAAKSKIPENTVTTKPRSVSKRTSKKSSATRSELDDDSDASPKVSSRKKKIEKGGKQKVSAPKKSSSKEKTEKVTKGKGKSKEKVDPSDDQLRDATLKILKDVDFNTATFTDILKQLAKQFDADLTPRKASIKIIIQEELTKLAEEAEDEEDEDAENAED 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1617 790 PANTHER DEK PROTEIN 277 786 IPR044198 GO:0003677|GO:0006325
Lal18g1617 790 MobiDBLite consensus disorder prediction 566 633 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 548 562 - -
Lal18g1617 790 SUPERFAMILY DEK C-terminal domain 714 770 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 685 722 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 58 103 - -
Lal18g1617 790 Pfam DEK C terminal domain 717 770 IPR014876 -
Lal18g1617 790 MobiDBLite consensus disorder prediction 538 722 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 1 23 - -
Lal18g1617 790 Coils Coil 763 790 - -
Lal18g1617 790 Coils Coil 236 256 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 1 31 - -
Lal18g1617 790 Coils Coil 466 486 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 634 648 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 113 185 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 58 357 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 656 678 - -
Lal18g1617 790 Gene3D - 708 772 - -
Lal18g1617 790 PANTHER PROTEIN DEK 277 786 - -
Lal18g1617 790 MobiDBLite consensus disorder prediction 193 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1617 Lal-Chr18 17587947 17595089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1617 K17046 - lang:109358916 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1617 18 17587947 17595089 Lal18g1617 18 17587947 17595089 ECH