Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1614 ATGAATACTGACTTCTTAATCATGTATTCTATTTCTTTTCATATTGCAGACCAGTCAGTTGTGGACCGTGCAATTAATGATATATGTGTCCTTATGCAGTGCAGTCGCCATAACCTTAACGTGGTTTCTGCCGGGAATGGGTACAATATGAGATCACACTCAATCTTAGGACATGCACCTTGCTTAAGACTTATGGGTGAAATTTGTATCTGCTATAGGTTAATTATGGGCTGGGTAAGATTCTTTGAAGGAAAAAGGATATTTGACTGCATCGGTTCTCCCAACACTGCCCACCCTGTTCCGGTGCATGTTGAAGAGATTAAGGTTTTCCAAAGACTAGCAAATGACCAGTTCTGTAATGCAAATCGTTGTATCATCATCACTGGAAGAGGCTATCCAGATATTCCTACAAGAAGGTTTTTGCGGCTACTAGTGGAGACTTTGCACCTGCCTGTTTATTGCTTGGTAGACTGTGATCCGTATGGTTTTGACATATTAACCACTTACAGATTTGGTTCCATGCAACTGGCTTATGACACGAAACATCTCGGTGTCCCAGAGATACAATGGCTTGGAGCTTTTCCTTCAGACCCTGAGAGATTTTTTGTTCCAAAGCAGTGTCTTCTTCCTTTAACTGCTGCAGACAAGAAAAAAATTGAAGCCATGTTGCTTAGATGCTACCTGCAAAAGGAGGTGCCACAATGGAGGTTGGAGCTAAAGCTGATGCTTAAGAAAGGAGTAAAGTTCGAGATTGAAGCTTTATCTGTGCATACACTTTCATTCTTGACAGAGTCTTACATACCATCTAAAATTCACAGTAAAGTAATCATCTAG 834 0.4077 MNTDFLIMYSISFHIADQSVVDRAINDICVLMQCSRHNLNVVSAGNGYNMRSHSILGHAPCLRLMGEICICYRLIMGWVRFFEGKRIFDCIGSPNTAHPVPVHVEEIKVFQRLANDQFCNANRCIIITGRGYPDIPTRRFLRLLVETLHLPVYCLVDCDPYGFDILTTYRFGSMQLAYDTKHLGVPEIQWLGAFPSDPERFFVPKQCLLPLTAADKKKIEAMLLRCYLQKEVPQWRLELKLMLKKGVKFEIEALSVHTLSFLTESYIPSKIHSKVII 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1614 277 SUPERFAMILY DNA topoisomerase IV, alpha subunit 14 273 IPR036078 GO:0003677|GO:0005694
Lal18g1614 277 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 8 273 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal18g1614 277 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 8 273 - -
Lal18g1614 277 Gene3D - 72 275 - -
Lal18g1614 277 PRINTS SPO11 homologue signature 10 30 IPR013048 GO:0003677|GO:0003918|GO:0042138
Lal18g1614 277 PRINTS SPO11 homologue signature 162 181 IPR013048 GO:0003677|GO:0003918|GO:0042138
Lal18g1614 277 PRINTS SPO11 homologue signature 197 221 IPR013048 GO:0003677|GO:0003918|GO:0042138
Lal18g1614 277 PRINTS SPO11 homologue signature 258 277 IPR013048 GO:0003677|GO:0003918|GO:0042138
Lal18g1614 277 CDD TOPRIM_TopoIIB_SPO 104 261 IPR034136 -
Lal18g1614 277 PRINTS DNA topoisomerase VI subunit A family signature 18 35 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal18g1614 277 PRINTS DNA topoisomerase VI subunit A family signature 36 51 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal18g1614 277 PRINTS DNA topoisomerase VI subunit A family signature 101 118 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal18g1614 277 PRINTS DNA topoisomerase VI subunit A family signature 125 146 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal18g1614 277 PRINTS DNA topoisomerase VI subunit A family signature 157 173 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1614 K10878 - gmx:100813920 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1614 18 17575208 17578794 Lal18g1614 18 17575208 17578794 ECH