Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1603 ATGAGTACCCCTTTGAAAACCATATCAGCTGCTCTGAAACTTGTTGATACCAAAAAGGAGAATCTCAAAAAAGCATTTGATGACCTTCAATCTCACTCTTCTCTTCTCTCTCTCCCCCACACTTGGTCTCAACTCGATTCCCATTTCACTTCTATTCACAATTCCCTCACTCATCGCTTCTTACTCCTCCAACAAAATCACCCATCTTCCTCCAACTCCATTTCACTCGATCAAAACCCCAAAGTTCCTAACTTTTCTTCATTCCCTAATGACCCAACAACAACGAAATCTAATCATACGGAACAAATGAGTGCCATATGCAAGGTGAATGATGGAAAAGGGTTGAGGAATTACCTTTTGGAGAATTACAAGAACATGGCCTCTATCAATCCTCAACTTGTGGCTGCATTCAAGTGTTCTCATGATCCCCCAAATATGGTTATTGATTCATTGGATGGGGTTATTGGTGCAAATGCATTGAAGGATAGTGGTGAAGTGAAGAGAATGAAGAAGGTTTGTGGTGTGTTGTTCCAAGTGTTGAGGGTTGTGTGTCCCAATGTGAGTGATAAGGTGAGGACTAGAGCAAATAGGTTGTTTCTAGAGTGGAAAAGAGGCTTGGTAAAGGATAATGCAGATGCAGCTGAGGCTATGGCTTTCTTGCATTTTGTGGCTACATATGGTTTGCTTTCTGAATTGACCACCGATGAGCTCGCTACCTTTTCGGCTATGGCTGCAACCAATTACGACCTTCCTGAGCTTTACCACAATATTGGTTTGACAGATAAAGTTCCTGGTCTTGTGCAGAAACTTGTAGATAAGGGCAAGCATATTCTGGCTGTCAAGTATGTTTTTCAGTTTAATCTTGCTGATAAGATCAGACCAGTTCCCCTTTTGCATGCTTATGTGAACGAGACTCGGAAACTTTCCGCAAGACTTTCCCAGGAAGGAAAGTCACTGGCTGAGATCACAGCTAGAGAGATCCATGGGTTGAAATCAGTAATTAAGGTTATTGAGAATCATAATCTTGAATCTGAATTTCCATGTGCAAGCCTTGAACAGCGTATAGAGGAACTGAAGAAGCAGAAGGCAAATCCTCCTAAGCATGAGCAGCAACAAAGTGGGGTCAAGCGTCCTCGAATATCTGCTCCAGTTGGTCCTGCAGCTGTTGTGAATAATGTCGGTAGTGCCAGTTCAACCATACACCAGTATGGACAACCTATTTTTCGTTCAACAGGTTTGTTGCCGGAACATCCAAATCCATTTTTGGGCTTGCCACCCATGCCATACGGCATGGTGCCCCCAACCCCAGCCATGCCATACGGTGTGGTGCCCCCAACCCCAGCCATGCCATATGGCATGGTGCCCCCAACCCCAGCCATCTCCCCTTATCCAGGTCCTTCAACTAGGCCTTATGGTCCTGCTGTTGTCCCGATGGGTCCCACTGGCAACTCTGGTCGAGGTGATCCTCATCTAACCCCATCAGAGCCACACTTGCCACCTTCTGGTTATGGTTTGCAACACTATTACCGGAATTCTTATCCTCGATAG 1548 0.4509 MSTPLKTISAALKLVDTKKENLKKAFDDLQSHSSLLSLPHTWSQLDSHFTSIHNSLTHRFLLLQQNHPSSSNSISLDQNPKVPNFSSFPNDPTTTKSNHTEQMSAICKVNDGKGLRNYLLENYKNMASINPQLVAAFKCSHDPPNMVIDSLDGVIGANALKDSGEVKRMKKVCGVLFQVLRVVCPNVSDKVRTRANRLFLEWKRGLVKDNADAAEAMAFLHFVATYGLLSELTTDELATFSAMAATNYDLPELYHNIGLTDKVPGLVQKLVDKGKHILAVKYVFQFNLADKIRPVPLLHAYVNETRKLSARLSQEGKSLAEITAREIHGLKSVIKVIENHNLESEFPCASLEQRIEELKKQKANPPKHEQQQSGVKRPRISAPVGPAAVVNNVGSASSTIHQYGQPIFRSTGLLPEHPNPFLGLPPMPYGMVPPTPAMPYGVVPPTPAMPYGMVPPTPAISPYPGPSTRPYGPAVVPMGPTGNSGRGDPHLTPSEPHLPPSGYGLQHYYRNSYPR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1603 515 MobiDBLite consensus disorder prediction 478 505 - -
Lal18g1603 515 MobiDBLite consensus disorder prediction 359 379 - -
Lal18g1603 515 PANTHER FRIGIDA-LIKE PROTEIN 4 439 - -
Lal18g1603 515 Pfam Frigida-like protein 99 366 IPR012474 -
Lal18g1603 515 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1603 Lal-Chr18 17511499 17516039 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1603 - - aprc:113847716 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1603 18 17511499 17516039 Lal18g1603 18 17511499 17516039 ECH
Lal18g1603 18 17511499 17516039 Lal18g1603 18 17511499 17516039 PCT