Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1598 ATGTGGAACTCACGCGCTCTTTATCTCCTTCTTCTTTACTCTTTCCTCCTTCTAGCTTCAGTTTCAGCTCAGAAATCAAACACCACCAGCGCTTGGAAAACACTCTCTGGAAGTCCACCATTGGTCATAGCACGCGGTGGTTTTTCAGGAATATTTCCTGATTCAAGTGACTATGCCTATAATCTGGCAATCATTACAAGTGTACCAGGTATCATTCTATGGTGTGATGTACAGTTAACAAAAGATGGAGCTGGGATTTGCTTTCCAGATATAAAACTTGACAATGCTACTGACATTTCAAACATTTTCCAAAACAAAAGTACAAATTACCTAGTTAATGGTGTACCCACCGGTGGCTATTTTTCTAAGGATTATACCCTCAAGGATTTATCCAATGTTCCCTTGACTCAGGGAGTATATTCTCGAAATAGTTTTTTTGACGGCAACCAATTTGCAATTCTTACTGTTGATGACTTAGTTACAGCAGTATCCCCACCAGGGCTGTGGTTGAACATTCAGCATGATGCGTTCTACTCACAACACAACTTGAGTATGAGAAGTTTTGTACTTTCTGTTTCTAGACGAGTTATTGTCAATTATATCTCATCACCAGAGGTTGGTTTTCTGAGAAGCATAACAGCACGCTTCAACCCAAAAACAACAAAGTTGGTCTTCAGGTTTCTTGGACAGGATGACACAGAACCATCAACCAATCAGACTTATGGTTCACTCTTGAAAAATCTTACATTTATCAAGACTTTCGCCTCTGGAATTCTTGTTCCCAAGGGATACATATGGCCTGTAGATGCTAGTCTTTATCTACAACCACATACATCTTTGGTCACAGATGCGCATAAATTGGGGCTGGAAGTATTTGCATCAGATTTTATTAATGATGTTCCATTCAGCTATAATTACAGTTATGATCCTGTTGCTGAGTGTCTCCAATTCATAGACAATGGAAACTTCTCTGTTGATGGTTTGCTATCTGACTTCCCAGTAACTCCATCTGAGGCTGTTGATATTGATTTGTCTTCTTATGATGCAGATTGCTTTGCTCACCTAGGTTCAAATGCCAAGCAAATCGACAACACTTTGATTATCTCAAAATATGGATCAAGTGGAGATTTTCCTGCTTGTACAGACATAGCATATAAACAGGCCGTATCAGATGGTGTGGATATTCTTGACTGTCCTGTTCAAATTTCAAAGGATGGAACACCATTTTGCTCAAGCTCCATCGATCTTATAGACAGTACAGTAGTTACTCAAACAAACTTCAGCATACTTGCCGCAACTATCCCTGAAATCAAACCTACTGGCAGTGGCATATTTTCCTTCAGCTTGAACTGGGATGATATTAAATCCTTGACCCCCTCAATATTGAACCCTTCTGTTAAATACAACTTGATCAGGAATCCAAAATATAGGAATGTTGGATCACTTTTAACGTTGTCTGAGTTCTTGTCATTTACTAAAAATCAGACTTCTCTACCAGGTGTTGTAATCATTATTGAGAACGCAGCCTATCTTGCAGAGAAGCAAGGATTTGGTGTGACCGATTCAGTCATTGACGCTTTGAGCAAAGCAGGTTATGATAAACCAGGGACCCAAAAAGTTTTTATTCAATCCACTGATAGCTCTGTTCTAATCAAGTTTAAGGAGAAAACCAATTACGAGCGTGTGTACAAGATTGACGAGGCTGTTGGTGATGCTGCTACTTCAGCTGTTGATGATATAAAAAGCTTTGCTAGTTCTGTGGTTGTCAACAAGAACTCTGTATTTCCCCTTAATGATGGCTTCCTTGTCACATCTACAAATACTGTGTCAAAACTAAAATCTTCCAATCTCTCGGTTTTCGTTGAAACTTTCAGCAATGAGTTTGTATCTCAGGCGTGGGATTTCTTCTCAGATGCCACCTCGGAGATCAACTCTTATATTCAGGGAACAGATATTGATGGTGTCATCACAGACTTCCCAAAAACTGCTAATAGATACAGAAAAAACAAATGCTTAAACTTAGGTAAGAACACACCTCCTTACATGCTAGCTGTTCAAACAGGGGGTCTTTTTGGACTCATCAGCAAAGGTTACTTGCCTCCGGCCGCGGCTCCGCTCCCACCTTTGTCAGATTCTGAGGTGATAGAGGCACCTTTGCCTCCTGTTTCCAAGGGGGTGCAGGCTTCTAGCCCTGCCCCTGAAACCAACCCAGGAACACAACCAAAGGGAAATGCACAACCCAAGGTCATTGCCTGCTTCTTCTTGTCCAGTCTTGCTGTGCTTGTAACTTCTCTTATTCTGATTTGA 2307 0.407 MWNSRALYLLLLYSFLLLASVSAQKSNTTSAWKTLSGSPPLVIARGGFSGIFPDSSDYAYNLAIITSVPGIILWCDVQLTKDGAGICFPDIKLDNATDISNIFQNKSTNYLVNGVPTGGYFSKDYTLKDLSNVPLTQGVYSRNSFFDGNQFAILTVDDLVTAVSPPGLWLNIQHDAFYSQHNLSMRSFVLSVSRRVIVNYISSPEVGFLRSITARFNPKTTKLVFRFLGQDDTEPSTNQTYGSLLKNLTFIKTFASGILVPKGYIWPVDASLYLQPHTSLVTDAHKLGLEVFASDFINDVPFSYNYSYDPVAECLQFIDNGNFSVDGLLSDFPVTPSEAVDIDLSSYDADCFAHLGSNAKQIDNTLIISKYGSSGDFPACTDIAYKQAVSDGVDILDCPVQISKDGTPFCSSSIDLIDSTVVTQTNFSILAATIPEIKPTGSGIFSFSLNWDDIKSLTPSILNPSVKYNLIRNPKYRNVGSLLTLSEFLSFTKNQTSLPGVVIIIENAAYLAEKQGFGVTDSVIDALSKAGYDKPGTQKVFIQSTDSSVLIKFKEKTNYERVYKIDEAVGDAATSAVDDIKSFASSVVVNKNSVFPLNDGFLVTSTNTVSKLKSSNLSVFVETFSNEFVSQAWDFFSDATSEINSYIQGTDIDGVITDFPKTANRYRKNKCLNLGKNTPPYMLAVQTGGLFGLISKGYLPPAAAPLPPLSDSEVIEAPLPPVSKGVQASSPAPETNPGTQPKGNAQPKVIACFFLSSLAVLVTSLILI 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1598 768 CDD GDPD_SHV3_repeat_1 40 339 - -
Lal18g1598 768 Pfam Glycerophosphoryl diester phosphodiesterase family 372 662 IPR030395 GO:0006629|GO:0008081
Lal18g1598 768 Pfam Glycerophosphoryl diester phosphodiesterase family 75 294 IPR030395 GO:0006629|GO:0008081
Lal18g1598 768 ProSiteProfiles GP-PDE domain profile. 40 340 IPR030395 GO:0006629|GO:0008081
Lal18g1598 768 ProSiteProfiles GP-PDE domain profile. 365 667 IPR030395 GO:0006629|GO:0008081
Lal18g1598 768 SUPERFAMILY PLC-like phosphodiesterases 364 667 IPR017946 GO:0006629|GO:0008081
Lal18g1598 768 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 10 766 - -
Lal18g1598 768 MobiDBLite consensus disorder prediction 723 743 - -
Lal18g1598 768 Gene3D Phosphatidylinositol (PI) phosphodiesterase 364 666 IPR017946 GO:0006629|GO:0008081
Lal18g1598 768 Gene3D Phosphatidylinositol (PI) phosphodiesterase 39 339 IPR017946 GO:0006629|GO:0008081
Lal18g1598 768 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 10 766 - -
Lal18g1598 768 SUPERFAMILY PLC-like phosphodiesterases 39 339 IPR017946 GO:0006629|GO:0008081
Lal18g1598 768 MobiDBLite consensus disorder prediction 728 743 - -
Lal18g1598 768 CDD GDPD_SHV3_repeat_2 366 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1598 Lal-Chr18 17480497 17489986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1598 16 768 Receptor kinase-like Gene Family AT4G26690 53.652 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1598 - - gmx:100811399 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1598 18 17480497 17489986 Lal18g1598 18 17480497 17489986 ECH
Lal18g1598 18 17480497 17489986 Lal18g1598 18 17480497 17489986 PCT